SNP Report

Basic Infomation

Name	rs6545845 dbSNP
Location	chr:2,61437044
Allele	G/C

LD-proxy of rSNPs(r²>0.8) (count: 38)

The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r² >=0.8.

rs_ID	r²[population][source]
rs10178135	0.89[ASN][1000 genomes]
rs10496092	0.80[AMR][1000 genomes];0.81[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs11125871	0.82[AMR][1000 genomes];0.80[EUR][1000 genomes]
rs11893880	0.87[AFR][1000 genomes];0.83[AMR][1000 genomes]
rs12053388	0.84[ASN][1000 genomes]
rs12615222	0.85[ASN][1000 genomes]
rs12620105	0.82[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs12998475	0.88[AMR][1000 genomes];0.81[EUR][1000 genomes]
rs1809028	0.96[ASN][1000 genomes]
rs2060824	0.81[ASN][1000 genomes]
rs2167566	0.81[AFR][1000 genomes];0.80[AMR][1000 genomes];0.82[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs2290324	0.98[ASN][1000 genomes]
rs2421116	0.91[ASN][1000 genomes]
rs2600665	0.93[AMR][1000 genomes];0.91[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs2694617	0.81[EUR][1000 genomes]
rs3087777	0.88[ASN][1000 genomes]
rs4672423	0.81[AFR][1000 genomes];1.00[AMR][1000 genomes];0.98[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs4672424	0.89[AFR][1000 genomes]
rs4672425	0.93[AMR][1000 genomes];0.98[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs4672429	0.85[ASN][1000 genomes]
rs4672431	0.82[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs62152270	0.85[ASN][1000 genomes]
rs6545847	0.92[AFR][1000 genomes];1.00[AMR][1000 genomes];0.98[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs6706786	0.81[ASN][1000 genomes]
rs6709441	0.98[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6734628	0.96[AMR][1000 genomes];0.95[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6738482	0.85[ASN][1000 genomes]
rs6739427	0.92[AFR][1000 genomes];0.98[AMR][1000 genomes];0.97[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs6749226	0.82[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs7566035	0.81[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs7570707	0.90[ASN][1000 genomes]
rs777585	0.87[AMR][1000 genomes];0.88[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs777588	0.90[AFR][1000 genomes];0.90[AMR][1000 genomes]
rs777589	0.87[AFR][1000 genomes];1.00[AMR][1000 genomes];0.98[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs777590	0.83[AFR][1000 genomes];0.98[AMR][1000 genomes];0.93[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs777591	0.94[AMR][1000 genomes];0.93[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs777593	0.98[AMR][1000 genomes];0.94[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs811372	0.85[ASN][1000 genomes]

rSNP related genes

Symbol	Regulation type
AHSA2	Distal transcriptional regulation

rSNP related regulatory elements

Proximal transcriptional regulation

Distal transcriptional regulation

Post-transcriptional regulation:within mature miRNA

Post-transcriptional regulation: associated with RNA binding protein

eQTL evidence (count: 0)