SNP Report

Basic Infomation

LD-proxy of rSNPs(r²>0.8) (count: 11)

The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r² >=0.8.

rs_ID	r²[population][source]
rs11125871	0.82[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs12998475	0.87[AMR][1000 genomes];0.88[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs4672423	0.83[AMR][1000 genomes]
rs6545845	0.87[AFR][1000 genomes];0.83[AMR][1000 genomes]
rs6545847	0.87[AFR][1000 genomes];0.83[AMR][1000 genomes]
rs6709441	0.81[AMR][1000 genomes]
rs6739427	0.87[AFR][1000 genomes];0.81[AMR][1000 genomes]
rs777588	0.92[AFR][1000 genomes];0.88[AMR][1000 genomes];0.92[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs777589	0.86[AFR][1000 genomes];0.83[AMR][1000 genomes]
rs777590	0.86[AFR][1000 genomes];0.81[AMR][1000 genomes]
rs777593	0.81[AMR][1000 genomes]

rSNP related genes

Symbol	Regulation type
USP34	Proximal transcriptional regulation
USP34	Distal transcriptional regulation
AHSA2	Distal transcriptional regulation

rSNP related regulatory elements

eQTL evidence (count: 0)