SNP Report
Name | rs12998475   dbSNP |
---|---|
Location | chr:2,61437487 |
Allele | T/C |
The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r2 >=0.8.
rs_ID | r2[population][source] |
---|---|
rs11125871 | 0.88[AMR][1000 genomes];0.90[EUR][1000 genomes];0.86[ASN][1000 genomes] |
rs11893880 | 0.87[AMR][1000 genomes];0.88[EUR][1000 genomes];0.84[ASN][1000 genomes] |
rs12620105 | 0.82[AFR][1000 genomes] |
rs1729662 | 0.83[AMR][1000 genomes] |
rs2600665 | 0.84[AMR][1000 genomes] |
rs4672423 | 0.88[AMR][1000 genomes] |
rs4672425 | 0.90[AFR][1000 genomes];0.84[AMR][1000 genomes];0.80[ASN][1000 genomes] |
rs6545845 | 0.88[AMR][1000 genomes];0.81[EUR][1000 genomes] |
rs6545847 | 0.88[AMR][1000 genomes] |
rs6709441 | 0.89[AMR][1000 genomes];0.80[EUR][1000 genomes] |
rs6734628 | 0.94[AFR][1000 genomes];0.87[AMR][1000 genomes] |
rs6739427 | 0.86[AMR][1000 genomes] |
rs7566035 | 0.85[AFR][1000 genomes] |
rs777588 | 0.99[AMR][1000 genomes];0.96[EUR][1000 genomes];0.93[ASN][1000 genomes] |
rs777589 | 0.88[AMR][1000 genomes] |
rs777590 | 0.86[AMR][1000 genomes] |
rs777591 | 0.83[AMR][1000 genomes] |
rs777593 | 0.89[AMR][1000 genomes] |
Symbol | Regulation type |
---|---|
AHSA2 | Distal transcriptional regulation |
Copyright: Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences Feedback
Last update: March 26, 2014