SNP Report

Basic Infomation

Name	rs4672431 dbSNP
Location	chr:2,61519922
Allele	C/A

LD-proxy of rSNPs(r²>0.8) (count: 42)

The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r² >=0.8.

rs_ID	r²[population][source]
rs10178135	0.90[ASN][1000 genomes]
rs10496092	0.99[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11125871	0.85[AFR][1000 genomes];0.82[AMR][1000 genomes]
rs11125872	0.89[ASN][1000 genomes]
rs12053388	0.96[AMR][1000 genomes];0.94[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12615222	0.98[ASN][1000 genomes]
rs12620105	0.81[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs12997538	0.89[AMR][1000 genomes];0.85[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs1809028	0.86[ASN][1000 genomes]
rs2060824	0.81[ASN][1000 genomes]
rs2167566	0.99[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2290324	0.84[ASN][1000 genomes]
rs2421116	0.91[ASN][1000 genomes]
rs2463102	0.93[AMR][1000 genomes];0.90[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs2593633	0.93[AMR][1000 genomes];0.91[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs2600665	0.85[ASN][1000 genomes]
rs2694617	0.94[AMR][1000 genomes];0.95[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs2694642	0.95[AMR][1000 genomes];0.88[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs28480287	0.87[ASN][1000 genomes]
rs4671402	0.87[ASN][1000 genomes]
rs4672423	0.81[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs4672425	0.80[ASN][1000 genomes]
rs4672429	0.98[ASN][1000 genomes]
rs62152270	0.97[ASN][1000 genomes]
rs6545845	0.82[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs6545847	0.81[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs6706786	0.81[ASN][1000 genomes]
rs6709441	0.81[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs6734628	0.80[AMR][1000 genomes];0.84[ASN][1000 genomes]
rs6738482	0.98[ASN][1000 genomes]
rs6739427	0.83[ASN][1000 genomes]
rs6749226	0.98[AFR][1000 genomes];1.00[AMR][1000 genomes];0.97[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs7566035	1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7578139	0.94[AMR][1000 genomes];0.93[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs777585	0.85[ASN][1000 genomes]
rs777589	0.81[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs777590	0.85[ASN][1000 genomes]
rs777591	0.84[ASN][1000 genomes]
rs777593	0.85[ASN][1000 genomes]
rs778143	0.95[AMR][1000 genomes];0.90[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs778144	0.95[AMR][1000 genomes];0.89[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs778152	0.88[AMR][1000 genomes];0.81[EUR][1000 genomes];0.81[ASN][1000 genomes]

rSNP related genes

Symbol	Regulation type
USP34	Distal transcriptional regulation

rSNP related regulatory elements

Proximal transcriptional regulation

Distal transcriptional regulation

Post-transcriptional regulation:within mature miRNA

Post-transcriptional regulation: associated with RNA binding protein

eQTL evidence (count: 0)