SNP Report

Basic Infomation

Name	rs2421116 dbSNP
Location	chr:2,61488411
Allele	A/G

LD-proxy of rSNPs(r²>0.8) (count: 40)

The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r² >=0.8.

rs_ID	r²[population][source]
rs10178135	0.91[AFR][1000 genomes];0.98[AMR][1000 genomes];0.98[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs10496092	0.91[ASN][1000 genomes]
rs11125872	0.81[ASN][1000 genomes]
rs12053388	0.91[ASN][1000 genomes]
rs12615222	0.82[AMR][1000 genomes];0.90[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs12620105	0.88[ASN][1000 genomes]
rs1809028	0.85[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs2060824	0.89[ASN][1000 genomes]
rs2167566	0.82[AFR][1000 genomes];0.91[ASN][1000 genomes]
rs2290324	0.86[AMR][1000 genomes];0.94[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs2463102	0.82[ASN][1000 genomes]
rs2593633	0.81[ASN][1000 genomes]
rs2600665	0.93[ASN][1000 genomes]
rs2694617	0.80[AFR][1000 genomes];0.81[ASN][1000 genomes]
rs28480287	0.80[AMR][1000 genomes];0.91[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs3087777	0.83[ASN][1000 genomes]
rs4671401	0.87[AMR][1000 genomes]
rs4671402	0.84[ASN][1000 genomes]
rs4672423	0.89[ASN][1000 genomes]
rs4672425	0.86[ASN][1000 genomes]
rs4672429	0.82[AMR][1000 genomes];0.90[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs4672431	0.91[ASN][1000 genomes]
rs62152270	0.82[AMR][1000 genomes];0.91[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs6545845	0.91[ASN][1000 genomes]
rs6545847	0.81[AFR][1000 genomes];0.91[ASN][1000 genomes]
rs6706786	0.90[ASN][1000 genomes]
rs6709441	0.91[ASN][1000 genomes]
rs6734628	0.91[ASN][1000 genomes]
rs6738482	0.96[AFR][1000 genomes];0.82[AMR][1000 genomes];0.90[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs6739427	0.81[AFR][1000 genomes];0.91[ASN][1000 genomes]
rs6749226	0.91[ASN][1000 genomes]
rs7566035	0.91[ASN][1000 genomes]
rs7570707	0.82[ASN][1000 genomes]
rs7578139	0.82[ASN][1000 genomes]
rs777585	0.93[ASN][1000 genomes]
rs777589	0.93[ASN][1000 genomes]
rs777590	0.91[ASN][1000 genomes]
rs777591	0.91[ASN][1000 genomes]
rs777593	0.93[ASN][1000 genomes]
rs811372	0.81[ASN][1000 genomes]

rSNP related genes

Symbol	Regulation type
USP34	Proximal transcriptional regulation
USP34	Distal transcriptional regulation

rSNP related regulatory elements

Proximal transcriptional regulation

Distal transcriptional regulation

Post-transcriptional regulation:within mature miRNA

Post-transcriptional regulation: associated with RNA binding protein

eQTL evidence (count: 0)