SNP Report
Name | rs2421116   dbSNP |
---|---|
Location | chr:2,61488411 |
Allele | A/G |
The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r2 >=0.8.
rs_ID | r2[population][source] |
---|---|
rs10178135 | 0.91[AFR][1000 genomes];0.98[AMR][1000 genomes];0.98[EUR][1000 genomes];0.98[ASN][1000 genomes] |
rs10496092 | 0.91[ASN][1000 genomes] |
rs11125872 | 0.81[ASN][1000 genomes] |
rs12053388 | 0.91[ASN][1000 genomes] |
rs12615222 | 0.82[AMR][1000 genomes];0.90[EUR][1000 genomes];0.93[ASN][1000 genomes] |
rs12620105 | 0.88[ASN][1000 genomes] |
rs1809028 | 0.85[EUR][1000 genomes];0.94[ASN][1000 genomes] |
rs2060824 | 0.89[ASN][1000 genomes] |
rs2167566 | 0.82[AFR][1000 genomes];0.91[ASN][1000 genomes] |
rs2290324 | 0.86[AMR][1000 genomes];0.94[EUR][1000 genomes];0.91[ASN][1000 genomes] |
rs2463102 | 0.82[ASN][1000 genomes] |
rs2593633 | 0.81[ASN][1000 genomes] |
rs2600665 | 0.93[ASN][1000 genomes] |
rs2694617 | 0.80[AFR][1000 genomes];0.81[ASN][1000 genomes] |
rs28480287 | 0.80[AMR][1000 genomes];0.91[EUR][1000 genomes];0.87[ASN][1000 genomes] |
rs3087777 | 0.83[ASN][1000 genomes] |
rs4671401 | 0.87[AMR][1000 genomes] |
rs4671402 | 0.84[ASN][1000 genomes] |
rs4672423 | 0.89[ASN][1000 genomes] |
rs4672425 | 0.86[ASN][1000 genomes] |
rs4672429 | 0.82[AMR][1000 genomes];0.90[EUR][1000 genomes];0.93[ASN][1000 genomes] |
rs4672431 | 0.91[ASN][1000 genomes] |
rs62152270 | 0.82[AMR][1000 genomes];0.91[EUR][1000 genomes];0.94[ASN][1000 genomes] |
rs6545845 | 0.91[ASN][1000 genomes] |
rs6545847 | 0.81[AFR][1000 genomes];0.91[ASN][1000 genomes] |
rs6706786 | 0.90[ASN][1000 genomes] |
rs6709441 | 0.91[ASN][1000 genomes] |
rs6734628 | 0.91[ASN][1000 genomes] |
rs6738482 | 0.96[AFR][1000 genomes];0.82[AMR][1000 genomes];0.90[EUR][1000 genomes];0.93[ASN][1000 genomes] |
rs6739427 | 0.81[AFR][1000 genomes];0.91[ASN][1000 genomes] |
rs6749226 | 0.91[ASN][1000 genomes] |
rs7566035 | 0.91[ASN][1000 genomes] |
rs7570707 | 0.82[ASN][1000 genomes] |
rs7578139 | 0.82[ASN][1000 genomes] |
rs777585 | 0.93[ASN][1000 genomes] |
rs777589 | 0.93[ASN][1000 genomes] |
rs777590 | 0.91[ASN][1000 genomes] |
rs777591 | 0.91[ASN][1000 genomes] |
rs777593 | 0.93[ASN][1000 genomes] |
rs811372 | 0.81[ASN][1000 genomes] |
Symbol | Regulation type |
---|---|
USP34 | Proximal transcriptional regulation |
USP34 | Distal transcriptional regulation |
Copyright: Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences Feedback
Last update: March 26, 2014