SNP Report

Basic Infomation

Name	rs10875754 dbSNP
Location	chr:12,48557922
Allele	G/C

LD-proxy of rSNPs(r²>0.8) (count: 75)

The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r² >=0.8.

rs_ID	r²[population][source]
rs1049392	1.00[JPT][hapmap]
rs10747529	0.86[CEU][hapmap];0.80[CHB][hapmap];1.00[JPT][hapmap]
rs10875733	1.00[JPT][hapmap]
rs10875739	0.85[CEU][hapmap];0.80[CHB][hapmap];1.00[JPT][hapmap]
rs10875741	0.80[ASN][1000 genomes]
rs10875744	0.82[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs10875752	1.00[JPT][hapmap];0.90[ASN][1000 genomes]
rs10875757	0.90[ASN][1000 genomes]
rs10875759	0.91[ASN][1000 genomes]
rs10875761	1.00[JPT][hapmap];0.91[ASN][1000 genomes]
rs10875765	0.86[ASN][1000 genomes]
rs10875766	0.90[CHB][hapmap];1.00[JPT][hapmap];0.90[ASN][1000 genomes]
rs11168350	0.94[JPT][hapmap]
rs11168353	1.00[JPT][hapmap]
rs11168354	1.00[JPT][hapmap]
rs11168358	1.00[JPT][hapmap]
rs11168363	1.00[JPT][hapmap]
rs11168364	1.00[JPT][hapmap]
rs11168373	1.00[JPT][hapmap]
rs11168404	1.00[JPT][hapmap]
rs11168417	1.00[JPT][hapmap]
rs11168424	1.00[JPT][hapmap];0.80[ASN][1000 genomes]
rs11168434	1.00[JPT][hapmap];0.92[ASN][1000 genomes]
rs11168435	1.00[JPT][hapmap];0.92[ASN][1000 genomes]
rs11168438	0.89[CHB][hapmap];1.00[JPT][hapmap];0.92[ASN][1000 genomes]
rs11168439	0.92[ASN][1000 genomes]
rs11168442	0.85[ASN][1000 genomes]
rs11168443	0.86[ASN][1000 genomes]
rs11168444	0.85[ASN][1000 genomes]
rs11168445	1.00[JPT][hapmap];0.85[ASN][1000 genomes]
rs11168446	0.85[ASN][1000 genomes]
rs11168447	0.85[ASN][1000 genomes]
rs11168448	1.00[JPT][hapmap];0.85[ASN][1000 genomes]
rs11168453	1.00[JPT][hapmap];0.85[ASN][1000 genomes]
rs11168454	1.00[JPT][hapmap];0.85[ASN][1000 genomes]
rs12422355	1.00[JPT][hapmap]
rs12423250	0.94[JPT][hapmap]
rs12425679	0.81[ASN][1000 genomes]
rs17122567	1.00[JPT][hapmap]
rs1859443	0.94[JPT][hapmap]
rs1978161	0.82[JPT][hapmap]
rs2158515	0.89[CEU][hapmap];0.81[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs2171643	0.86[ASN][1000 genomes]
rs2286020	1.00[JPT][hapmap];0.81[ASN][1000 genomes]
rs2408954	1.00[JPT][hapmap]
rs3742075	0.94[JPT][hapmap]
rs3825403	0.85[CEU][hapmap];0.80[CHB][hapmap];1.00[JPT][hapmap]
rs4258439	0.89[CEU][hapmap];1.00[JPT][hapmap]
rs56097189	0.90[ASN][1000 genomes]
rs57430775	0.81[ASN][1000 genomes]
rs58556309	0.81[ASN][1000 genomes]
rs59537300	0.86[ASN][1000 genomes]
rs6580658	0.90[CHB][hapmap];0.81[JPT][hapmap];0.86[ASN][1000 genomes]
rs66507954	0.85[ASN][1000 genomes]
rs7132898	0.94[ASN][1000 genomes]
rs7133274	0.85[ASN][1000 genomes]
rs7136243	0.85[ASN][1000 genomes]
rs7136782	0.86[ASN][1000 genomes]
rs7136788	0.84[ASN][1000 genomes]
rs7138917	0.83[CEU][hapmap]
rs7299704	0.85[CEU][hapmap];0.80[CHB][hapmap];1.00[JPT][hapmap]
rs7302354	1.00[JPT][hapmap]
rs7303677	1.00[JPT][hapmap]
rs7304428	0.80[ASN][1000 genomes]
rs73105950	0.85[ASN][1000 genomes]
rs73304926	0.85[ASN][1000 genomes]
rs7484942	0.90[CHB][hapmap];1.00[JPT][hapmap];0.92[ASN][1000 genomes]
rs765260	0.90[CHB][hapmap];1.00[JPT][hapmap]
rs7962390	1.00[JPT][hapmap];0.86[ASN][1000 genomes]
rs7962569	0.94[JPT][hapmap];0.86[ASN][1000 genomes]
rs8181670	1.00[JPT][hapmap];0.91[ASN][1000 genomes]
rs886589	0.90[CHB][hapmap];1.00[JPT][hapmap]
rs954326	0.94[JPT][hapmap]
rs9651981	0.94[JPT][hapmap]
rs9804751	0.94[JPT][hapmap]

rSNP related genes

Symbol	Regulation type
ENSG00000258051	Proximal transcriptional regulation
ASB8	Distal transcriptional regulation
ENSG00000258051	Distal transcriptional regulation

rSNP related regulatory elements

Proximal transcriptional regulation

Distal transcriptional regulation

Post-transcriptional regulation:within mature miRNA

Post-transcriptional regulation: associated with RNA binding protein

eQTL evidence (count: 0)