SNP Report
Basic Infomation
| Name | rs10875765 dbSNP |
|---|---|
| Location | chr:12,48583632 |
| Allele | T/C |
LD-proxy of rSNPs(r2>0.8) (count: 35)
The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r2 >=0.8.
| rs_ID | r2[population][source] |
|---|---|
| rs10875752 | 0.87[ASN][1000 genomes] |
| rs10875754 | 0.86[ASN][1000 genomes] |
| rs10875757 | 0.92[ASN][1000 genomes] |
| rs10875759 | 0.93[ASN][1000 genomes] |
| rs10875761 | 0.93[ASN][1000 genomes] |
| rs10875766 | 0.90[ASN][1000 genomes] |
| rs11168434 | 0.89[ASN][1000 genomes] |
| rs11168435 | 0.89[ASN][1000 genomes] |
| rs11168438 | 0.82[AFR][1000 genomes];0.98[AMR][1000 genomes];0.96[EUR][1000 genomes];0.94[ASN][1000 genomes] |
| rs11168439 | 0.80[AMR][1000 genomes];0.94[ASN][1000 genomes] |
| rs11168442 | 0.99[ASN][1000 genomes] |
| rs11168443 | 0.96[AFR][1000 genomes];0.80[AMR][1000 genomes];1.00[ASN][1000 genomes] |
| rs11168444 | 0.81[AFR][1000 genomes];0.99[ASN][1000 genomes] |
| rs11168445 | 0.99[ASN][1000 genomes] |
| rs11168446 | 0.81[AFR][1000 genomes];0.99[ASN][1000 genomes] |
| rs11168447 | 0.81[AFR][1000 genomes];0.99[ASN][1000 genomes] |
| rs11168448 | 0.99[ASN][1000 genomes] |
| rs11168453 | 0.99[ASN][1000 genomes] |
| rs11168454 | 0.99[ASN][1000 genomes] |
| rs2171643 | 0.98[ASN][1000 genomes] |
| rs56097189 | 0.87[AMR][1000 genomes];0.96[EUR][1000 genomes];0.96[ASN][1000 genomes] |
| rs59537300 | 0.98[ASN][1000 genomes] |
| rs6580658 | 0.92[AFR][1000 genomes];0.80[AMR][1000 genomes];1.00[ASN][1000 genomes] |
| rs66507954 | 0.81[AFR][1000 genomes];0.99[ASN][1000 genomes] |
| rs7132898 | 0.92[ASN][1000 genomes] |
| rs7133274 | 0.99[ASN][1000 genomes] |
| rs7136243 | 0.81[AFR][1000 genomes];0.99[ASN][1000 genomes] |
| rs7136782 | 0.89[AFR][1000 genomes];0.80[AMR][1000 genomes];1.00[ASN][1000 genomes] |
| rs7136788 | 0.98[ASN][1000 genomes] |
| rs73105950 | 0.99[ASN][1000 genomes] |
| rs73304926 | 0.99[ASN][1000 genomes] |
| rs7484942 | 0.80[AMR][1000 genomes];0.94[ASN][1000 genomes] |
| rs7962390 | 0.98[ASN][1000 genomes] |
| rs7962569 | 0.98[ASN][1000 genomes] |
| rs8181670 | 0.93[ASN][1000 genomes] |
rSNP related genes
| Symbol | Regulation type |
|---|---|
| ENSG00000269514 | Distal transcriptional regulation |
rSNP related regulatory elements
Proximal transcriptional regulation
Distal transcriptional regulation
Post-transcriptional regulation:within mature miRNA
Post-transcriptional regulation: associated with RNA binding protein
eQTL evidence (count: 0)
Copyright: Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences Feedback
Last update: March 26, 2014