SNP Report
Name | rs644853   dbSNP |
---|---|
Location | chr:1,155706217 |
Allele | T/G |
The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r2 >=0.8.
rs_ID | r2[population][source] |
---|---|
rs10752611 | 1.00[JPT][hapmap] |
rs10908470 | 1.00[JPT][hapmap] |
rs10908471 | 0.92[JPT][hapmap] |
rs10908479 | 0.84[JPT][hapmap] |
rs10908481 | 0.91[JPT][hapmap] |
rs10908482 | 0.87[AFR][1000 genomes] |
rs11264380 | 1.00[JPT][hapmap] |
rs11264381 | 1.00[JPT][hapmap] |
rs11264387 | 0.83[JPT][hapmap] |
rs12035524 | 0.91[JPT][hapmap] |
rs12047756 | 0.84[JPT][hapmap] |
rs12143948 | 1.00[JPT][hapmap] |
rs12744132 | 0.84[JPT][hapmap] |
rs1556488 | 0.90[JPT][hapmap] |
rs2048431 | 0.91[JPT][hapmap] |
rs2175391 | 0.91[JPT][hapmap] |
rs2666826 | 0.82[JPT][hapmap] |
rs348196 | 0.91[JPT][hapmap] |
rs3738590 | 0.91[JPT][hapmap] |
rs3892792 | 0.92[JPT][hapmap] |
rs475550 | 0.91[JPT][hapmap] |
rs490608 | 0.87[AFR][1000 genomes] |
rs6427286 | 0.84[JPT][hapmap];0.94[YRI][hapmap];0.88[AFR][1000 genomes] |
rs6427287 | 0.88[AFR][1000 genomes] |
rs6696888 | 1.00[JPT][hapmap] |
rs678157 | 0.84[JPT][hapmap] |
rs708611 | 0.87[YRI][hapmap] |
rs7541060 | 0.84[JPT][hapmap];0.94[YRI][hapmap];0.88[AFR][1000 genomes] |
rs7550402 | 0.87[AFR][1000 genomes] |
rs821551 | 0.85[CHB][hapmap];1.00[JPT][hapmap] |
rs822478 | 0.84[CHB][hapmap];0.81[JPT][hapmap] |
rs822490 | 0.93[YRI][hapmap] |
rs860295 | 0.93[YRI][hapmap] |
rs9426933 | 0.88[AFR][1000 genomes] |
Symbol | Regulation type |
---|---|
DAP3 | Proximal transcriptional regulation |
MSTO2P | RNA binding protein mediated regulation |
MSTO1 | RNA binding protein mediated regulation |
DAP3 | RNA binding protein mediated regulation |
Copyright: Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences Feedback
Last update: March 26, 2014