SNP Report

Basic Infomation

Name	rs9295482 dbSNP
Location	chr:6,20761234
Allele	A/C

LD-proxy of rSNPs(r²>0.8) (count: 69)

The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r² >=0.8.

rs_ID	r²[population][source]
rs11751916	0.80[ASN][1000 genomes]
rs11752477	0.94[CHB][hapmap]
rs11752772	0.85[ASN][1000 genomes]
rs13197106	0.81[CHB][hapmap]
rs13213979	0.83[CHB][hapmap];0.81[ASN][1000 genomes]
rs13217519	0.83[CHB][hapmap];0.83[CHD][hapmap];0.81[ASN][1000 genomes]
rs17234378	1.00[ASW][hapmap]
rs2745933	0.82[CEU][hapmap]
rs2819997	0.83[CEU][hapmap]
rs2820000	0.83[CEU][hapmap]
rs34933309	0.83[ASN][1000 genomes]
rs35499882	1.00[AFR][1000 genomes];0.99[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4293992	0.89[CHB][hapmap]
rs4370355	0.94[CHB][hapmap]
rs4478387	0.83[CEU][hapmap]
rs4492184	0.89[CHB][hapmap]
rs4496779	0.81[ASN][1000 genomes]
rs4585542	0.87[CEU][hapmap]
rs4710942	0.89[CHB][hapmap];0.86[CHD][hapmap];0.81[ASN][1000 genomes]
rs4710943	0.83[CHB][hapmap];0.86[CHD][hapmap];0.82[ASN][1000 genomes]
rs4710950	0.94[CHB][hapmap];0.89[GIH][hapmap];0.81[ASN][1000 genomes]
rs4710954	0.94[CHB][hapmap]
rs4712545	0.83[CEU][hapmap]
rs4712551	0.94[CHB][hapmap];1.00[YRI][hapmap];0.82[ASN][1000 genomes]
rs4712563	0.86[CHB][hapmap]
rs4712565	0.88[CHB][hapmap]
rs62397655	0.81[ASN][1000 genomes]
rs6456379	0.94[CHB][hapmap];0.83[GIH][hapmap]
rs6456385	0.88[CHB][hapmap]
rs6920918	0.88[CHB][hapmap]
rs6925153	0.94[CHB][hapmap];0.89[GIH][hapmap];0.80[ASN][1000 genomes]
rs6936300	0.84[CEU][hapmap]
rs6936840	0.84[CEU][hapmap]
rs9295479	0.81[CHB][hapmap];0.81[ASN][1000 genomes]
rs9295481	0.83[CHB][hapmap];0.83[CHD][hapmap];0.82[ASN][1000 genomes]
rs9348443	0.82[CEU][hapmap]
rs9348446	0.94[CHB][hapmap];0.81[ASN][1000 genomes]
rs9348448	0.94[CHB][hapmap]
rs9350278	0.94[CHB][hapmap];0.88[CHD][hapmap];0.85[ASN][1000 genomes]
rs9350279	0.84[AMR][1000 genomes];0.95[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs9350296	0.94[CHB][hapmap]
rs9350298	0.88[CHB][hapmap]
rs9356750	0.82[ASN][1000 genomes]
rs9356752	0.84[CEU][hapmap]
rs9356754	0.89[CHB][hapmap];0.80[GIH][hapmap]
rs9356755	0.94[CHB][hapmap]
rs9358362	0.83[CHB][hapmap];0.82[ASN][1000 genomes]
rs9358366	0.84[CEU][hapmap]
rs9358371	0.94[CHB][hapmap];0.81[ASN][1000 genomes]
rs9358377	0.83[CHB][hapmap]
rs9366359	0.82[ASN][1000 genomes]
rs9368227	0.83[CHB][hapmap];0.82[ASN][1000 genomes]
rs9368228	0.82[CHB][hapmap];0.82[ASN][1000 genomes]
rs9368229	0.82[ASN][1000 genomes]
rs9368230	0.82[ASN][1000 genomes]
rs9368232	0.83[CEU][hapmap]
rs9368237	0.83[ASN][1000 genomes]
rs9368238	0.89[CHB][hapmap];0.82[ASN][1000 genomes]
rs9368239	0.80[ASN][1000 genomes]
rs9368243	0.94[CHB][hapmap]
rs9368248	0.94[CHB][hapmap]
rs9368251	0.94[CHB][hapmap]
rs9460572	0.88[CHB][hapmap]
rs9465885	0.85[YRI][hapmap]
rs9465886	0.84[CEU][hapmap]
rs9465891	0.84[CEU][hapmap]
rs9465892	0.82[YRI][hapmap]
rs9465894	0.85[YRI][hapmap]
rs9465931	0.83[CHB][hapmap]

rSNP related genes

Symbol	Regulation type
ENSG00000233848	RNA binding protein mediated regulation
CDKAL1	RNA binding protein mediated regulation

rSNP related regulatory elements

Proximal transcriptional regulation

Distal transcriptional regulation

Post-transcriptional regulation:within mature miRNA

Post-transcriptional regulation: associated with RNA binding protein

eQTL evidence (count: 0)