SNP Report

Basic Infomation

Name	rs9295479 dbSNP
Location	chr:6,20736038
Allele	T/A

LD-proxy of rSNPs(r²>0.8) (count: 34)

The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r² >=0.8.

rs_ID	r²[population][source]
rs11752477	0.83[CHB][hapmap]
rs13213979	0.94[CHB][hapmap];1.00[JPT][hapmap];1.00[ASN][1000 genomes]
rs13217519	0.94[CHB][hapmap];1.00[JPT][hapmap];1.00[ASN][1000 genomes]
rs34933309	0.98[AMR][1000 genomes];0.99[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs35499882	0.81[ASN][1000 genomes]
rs4370355	0.83[CHB][hapmap]
rs4710942	1.00[CEU][hapmap];0.94[CHB][hapmap];1.00[JPT][hapmap];0.98[AMR][1000 genomes];0.99[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs4710943	1.00[CEU][hapmap];0.94[CHB][hapmap];1.00[JPT][hapmap];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs4710950	0.83[CHB][hapmap]
rs4710954	0.83[CHB][hapmap]
rs4712551	0.83[CHB][hapmap]
rs62397655	0.81[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs6456379	0.83[CHB][hapmap]
rs6925153	0.83[CHB][hapmap]
rs71563973	0.95[AMR][1000 genomes];0.98[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs9295481	0.94[CHB][hapmap];1.00[JPT][hapmap];0.98[ASN][1000 genomes]
rs9295482	0.81[CHB][hapmap];0.81[ASN][1000 genomes]
rs9348446	0.83[CHB][hapmap]
rs9348448	0.83[CHB][hapmap]
rs9350278	0.95[CEU][hapmap];0.83[CHB][hapmap];1.00[JPT][hapmap];0.97[AMR][1000 genomes];0.98[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs9350279	0.84[ASN][1000 genomes]
rs9350296	0.83[CHB][hapmap]
rs9356750	0.98[ASN][1000 genomes]
rs9356755	0.83[CHB][hapmap]
rs9358362	0.94[CHB][hapmap];1.00[JPT][hapmap];0.98[ASN][1000 genomes]
rs9358371	0.83[CHB][hapmap]
rs9366359	0.91[AMR][1000 genomes];0.99[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs9368227	1.00[CEU][hapmap];0.94[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.96[AFR][1000 genomes];0.98[AMR][1000 genomes];1.00[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs9368228	0.82[CEU][hapmap];0.94[CHB][hapmap];1.00[JPT][hapmap];0.98[ASN][1000 genomes]
rs9368229	0.98[ASN][1000 genomes]
rs9368230	0.98[ASN][1000 genomes]
rs9368243	0.83[CHB][hapmap]
rs9368248	0.83[CHB][hapmap]
rs9368251	0.83[CHB][hapmap]

rSNP related genes

Symbol	Regulation type
CDKAL1	RNA binding protein mediated regulation

rSNP related regulatory elements

Proximal transcriptional regulation

Distal transcriptional regulation

Post-transcriptional regulation:within mature miRNA

Post-transcriptional regulation: associated with RNA binding protein

eQTL evidence (count: 0)