SNP Report
Basic Infomation
| Name | rs35499882 dbSNP |
|---|---|
| Location | chr:6,20758331 |
| Allele | T/A |
LD-proxy of rSNPs(r2>0.8) (count: 29)
The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r2 >=0.8.
| rs_ID | r2[population][source] |
|---|---|
| rs11751916 | 0.80[ASN][1000 genomes] |
| rs11752772 | 0.85[ASN][1000 genomes] |
| rs13213979 | 0.81[ASN][1000 genomes] |
| rs13217519 | 0.81[ASN][1000 genomes] |
| rs34933309 | 0.83[ASN][1000 genomes] |
| rs4496779 | 0.81[ASN][1000 genomes] |
| rs4710942 | 0.81[ASN][1000 genomes] |
| rs4710943 | 0.82[ASN][1000 genomes] |
| rs4710950 | 0.81[ASN][1000 genomes] |
| rs4712551 | 0.82[ASN][1000 genomes] |
| rs62397655 | 0.81[ASN][1000 genomes] |
| rs6925153 | 0.80[ASN][1000 genomes] |
| rs9295479 | 0.81[ASN][1000 genomes] |
| rs9295481 | 0.82[ASN][1000 genomes] |
| rs9295482 | 1.00[AFR][1000 genomes];0.99[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes] |
| rs9348446 | 0.81[ASN][1000 genomes] |
| rs9350278 | 0.85[ASN][1000 genomes] |
| rs9350279 | 0.85[AMR][1000 genomes];0.97[EUR][1000 genomes];0.97[ASN][1000 genomes] |
| rs9356750 | 0.82[ASN][1000 genomes] |
| rs9358362 | 0.82[ASN][1000 genomes] |
| rs9358371 | 0.81[ASN][1000 genomes] |
| rs9366359 | 0.82[ASN][1000 genomes] |
| rs9368227 | 0.82[ASN][1000 genomes] |
| rs9368228 | 0.82[ASN][1000 genomes] |
| rs9368229 | 0.82[ASN][1000 genomes] |
| rs9368230 | 0.82[ASN][1000 genomes] |
| rs9368237 | 0.83[ASN][1000 genomes] |
| rs9368238 | 0.82[ASN][1000 genomes] |
| rs9368239 | 0.80[ASN][1000 genomes] |
rSNP related genes
| Symbol | Regulation type |
|---|---|
| ENSG00000233848 | RNA binding protein mediated regulation |
| CDKAL1 | RNA binding protein mediated regulation |
rSNP related regulatory elements
Proximal transcriptional regulation
Distal transcriptional regulation
Post-transcriptional regulation:within mature miRNA
Post-transcriptional regulation: associated with RNA binding protein
eQTL evidence (count: 0)
Copyright: Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences Feedback
Last update: March 26, 2014