SNP Report

Basic Infomation

LD-proxy of rSNPs(r²>0.8) (count: 11)

The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r² >=0.8.

rs_ID	r²[population][source]
rs17234378	0.80[CEU][hapmap]
rs17826361	1.00[CEU][hapmap];0.87[YRI][hapmap];0.82[EUR][1000 genomes]
rs9295482	0.85[YRI][hapmap]
rs9460561	0.82[EUR][1000 genomes]
rs9460569	0.89[CEU][hapmap]
rs9465892	1.00[CEU][hapmap];1.00[YRI][hapmap];0.84[EUR][1000 genomes]
rs9465894	1.00[CEU][hapmap];1.00[YRI][hapmap];0.84[EUR][1000 genomes]
rs9465903	0.80[EUR][1000 genomes]
rs9465908	0.82[EUR][1000 genomes]
rs9465917	1.00[CEU][hapmap];0.86[EUR][1000 genomes]
rs9465921	1.00[CEU][hapmap];0.85[YRI][hapmap];0.82[EUR][1000 genomes]

rSNP related genes

Symbol	Regulation type
ENSG00000233848	RNA binding protein mediated regulation
CDKAL1	RNA binding protein mediated regulation

rSNP related regulatory elements

eQTL evidence (count: 0)