SNP Report

Basic Infomation

LD-proxy of rSNPs(r²>0.8) (count: 12)

The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r² >=0.8.

rs_ID	r²[population][source]
rs17234378	0.80[CEU][hapmap];1.00[YRI][hapmap];1.00[ASN][1000 genomes]
rs9460561	0.92[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9460569	0.89[CEU][hapmap];0.85[YRI][hapmap];1.00[AMR][1000 genomes];0.88[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9460571	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.82[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9465885	1.00[CEU][hapmap];0.87[YRI][hapmap];0.82[EUR][1000 genomes]
rs9465892	1.00[CEU][hapmap];0.82[YRI][hapmap];0.92[AFR][1000 genomes];0.90[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9465894	1.00[CEU][hapmap];0.85[YRI][hapmap];0.92[AFR][1000 genomes];0.90[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9465903	0.92[AFR][1000 genomes];0.90[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9465908	0.92[AFR][1000 genomes];0.92[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9465917	1.00[CEU][hapmap];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9465921	1.00[CEU][hapmap];1.00[YRI][hapmap];1.00[AFR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9465930	1.00[AMR][1000 genomes];0.80[EUR][1000 genomes]

rSNP related genes

Symbol	Regulation type
CDKAL1	RNA binding protein mediated regulation

rSNP related regulatory elements

eQTL evidence (count: 0)