SNP Report

Basic Infomation

Name	rs4934134 dbSNP
Location	chr:10,82160582
Allele	C/T

LD-proxy of rSNPs(r²>0.8) (count: 37)

The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r² >=0.8.

rs_ID	r²[population][source]
rs10160056	0.92[CHB][hapmap];0.84[ASN][1000 genomes]
rs10887871	0.84[CHB][hapmap]
rs10887873	0.81[CHB][hapmap]
rs11202832	0.81[CHB][hapmap];0.85[JPT][hapmap];0.86[ASN][1000 genomes]
rs12220642	0.96[CEU][hapmap]
rs12220655	0.96[CEU][hapmap]
rs12253992	0.81[AFR][1000 genomes];0.84[ASN][1000 genomes]
rs12260866	0.82[AFR][1000 genomes];0.92[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs12262228	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12262748	0.92[AFR][1000 genomes];0.98[AMR][1000 genomes];0.97[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs14073	0.81[CHB][hapmap]
rs1538822	1.00[CHB][hapmap];0.85[ASN][1000 genomes]
rs1815650	0.84[ASN][1000 genomes]
rs1870143	0.81[CHB][hapmap]
rs1870144	0.81[CHB][hapmap]
rs2168721	0.85[CEU][hapmap]
rs3195896	0.83[CHB][hapmap]
rs3195899	0.81[CHB][hapmap]
rs4146515	0.92[CEU][hapmap];0.86[EUR][1000 genomes]
rs4934147	0.84[CHB][hapmap]
rs6585989	0.81[CHB][hapmap]
rs6585994	1.00[CEU][hapmap];0.90[CHB][hapmap];0.84[EUR][1000 genomes]
rs7067612	0.95[AMR][1000 genomes];0.95[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7071752	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.95[YRI][hapmap];1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7074356	0.90[CHB][hapmap]
rs7081889	0.85[JPT][hapmap];0.89[YRI][hapmap];0.82[ASN][1000 genomes]
rs7083519	0.82[CEU][hapmap]
rs7088374	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7088400	0.90[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs7092237	0.85[JPT][hapmap];0.89[YRI][hapmap];0.82[ASN][1000 genomes]
rs7097080	0.90[CHB][hapmap]
rs7898558	0.81[CHB][hapmap]
rs7907224	0.81[CHB][hapmap]
rs7909792	0.85[ASN][1000 genomes]
rs8735	0.81[CHB][hapmap]
rs946890	0.96[AFR][1000 genomes];0.98[AMR][1000 genomes];0.97[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs9787439	0.93[CEU][hapmap]

rSNP related genes

Symbol	Regulation type
FAM213A	Distal transcriptional regulation

rSNP related regulatory elements

Proximal transcriptional regulation

Distal transcriptional regulation

Post-transcriptional regulation:within mature miRNA

Post-transcriptional regulation: associated with RNA binding protein

eQTL evidence (count: 2)

eQTL related gene	Source
SLC35E1	SCAN
DYDC2	seeQTL