SNP Report

Basic Infomation

Name	rs7083519 dbSNP
Location	chr:10,82207524
Allele	C/G

LD-proxy of rSNPs(r²>0.8) (count: 64)

The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r² >=0.8.

rs_ID	r²[population][source]
rs10736366	0.98[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10788626	1.00[JPT][hapmap];0.96[ASN][1000 genomes]
rs10788627	1.00[JPT][hapmap];0.96[ASN][1000 genomes]
rs10788630	0.96[ASN][1000 genomes]
rs10788631	0.96[ASN][1000 genomes]
rs10887880	1.00[JPT][hapmap];0.96[ASN][1000 genomes]
rs10887881	1.00[JPT][hapmap];0.96[ASN][1000 genomes]
rs10887884	1.00[JPT][hapmap];0.96[ASN][1000 genomes]
rs10887890	1.00[JPT][hapmap];0.96[ASN][1000 genomes]
rs10887891	0.93[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10887894	1.00[CHB][hapmap];1.00[JPT][hapmap];0.96[ASN][1000 genomes]
rs10887895	0.92[ASN][1000 genomes]
rs10887896	0.96[ASN][1000 genomes]
rs10887900	1.00[CHB][hapmap];1.00[JPT][hapmap];0.96[ASN][1000 genomes]
rs10887901	1.00[CHB][hapmap];1.00[JPT][hapmap];0.96[ASN][1000 genomes]
rs10887902	1.00[CHB][hapmap];1.00[JPT][hapmap];0.96[ASN][1000 genomes]
rs10887903	1.00[CHB][hapmap];1.00[JPT][hapmap];0.96[ASN][1000 genomes]
rs10887905	1.00[CHB][hapmap];1.00[JPT][hapmap];0.96[ASN][1000 genomes]
rs10887914	1.00[CHB][hapmap];1.00[JPT][hapmap];0.96[ASN][1000 genomes]
rs11202923	1.00[JPT][hapmap];0.96[ASN][1000 genomes]
rs11202957	1.00[CHB][hapmap];1.00[JPT][hapmap];0.96[ASN][1000 genomes]
rs11202959	1.00[CHB][hapmap];1.00[JPT][hapmap];0.96[ASN][1000 genomes]
rs11202960	1.00[CHB][hapmap];1.00[JPT][hapmap];0.96[ASN][1000 genomes]
rs11202963	1.00[CHB][hapmap];1.00[JPT][hapmap];0.96[ASN][1000 genomes]
rs12220642	0.89[CEU][hapmap];0.82[EUR][1000 genomes]
rs12220655	0.89[CEU][hapmap];0.83[EUR][1000 genomes]
rs12245180	1.00[CHB][hapmap];1.00[JPT][hapmap];0.96[ASN][1000 genomes]
rs12246432	1.00[CHB][hapmap]
rs12246441	1.00[CHB][hapmap]
rs12260962	1.00[CHB][hapmap]
rs12773636	1.00[CHB][hapmap]
rs17680103	1.00[CHB][hapmap]
rs17680741	1.00[CHB][hapmap]
rs1870146	1.00[CHB][hapmap]
rs1870147	1.00[CHB][hapmap];1.00[JPT][hapmap];0.96[ASN][1000 genomes]
rs1902661	0.89[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs2125040	1.00[CHB][hapmap];1.00[JPT][hapmap];0.96[ASN][1000 genomes]
rs2168721	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.98[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2343550	1.00[CHB][hapmap]
rs4933390	1.00[CHB][hapmap];1.00[JPT][hapmap];0.96[ASN][1000 genomes]
rs4934134	0.82[CEU][hapmap]
rs4934165	1.00[JPT][hapmap];0.96[ASN][1000 genomes]
rs4934167	1.00[CHB][hapmap];1.00[JPT][hapmap];0.96[ASN][1000 genomes]
rs4934168	1.00[JPT][hapmap];0.96[ASN][1000 genomes]
rs4934170	1.00[JPT][hapmap];0.96[ASN][1000 genomes]
rs4934189	0.96[ASN][1000 genomes]
rs55823231	0.96[ASN][1000 genomes]
rs59028692	0.96[ASN][1000 genomes]
rs59643748	0.96[ASN][1000 genomes]
rs6585994	0.85[CEU][hapmap]
rs7071752	0.85[CEU][hapmap]
rs7075355	0.96[ASN][1000 genomes]
rs7077373	1.00[CHB][hapmap];1.00[JPT][hapmap];0.96[ASN][1000 genomes]
rs7078254	1.00[CHB][hapmap];1.00[JPT][hapmap];0.96[ASN][1000 genomes]
rs7081136	1.00[CHB][hapmap]
rs7085606	1.00[CHB][hapmap];1.00[JPT][hapmap];0.96[ASN][1000 genomes]
rs7088877	0.96[ASN][1000 genomes]
rs7095954	1.00[CHB][hapmap];1.00[JPT][hapmap];0.96[ASN][1000 genomes]
rs7096715	0.82[EUR][1000 genomes]
rs7895779	0.96[ASN][1000 genomes]
rs7902355	1.00[CHB][hapmap]
rs7917136	0.96[ASN][1000 genomes]
rs7917145	0.96[ASN][1000 genomes]
rs878651	1.00[CHB][hapmap]

rSNP related genes

Symbol	Regulation type
TSPAN14	Distal transcriptional regulation

rSNP related regulatory elements

Proximal transcriptional regulation

Distal transcriptional regulation

Post-transcriptional regulation:within mature miRNA

Post-transcriptional regulation: associated with RNA binding protein

eQTL evidence (count: 0)