SNP Report

Basic Infomation

Name	rs4934147 dbSNP
Location	chr:10,82186261
Allele	A/G

LD-proxy of rSNPs(r²>0.8) (count: 30)

The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r² >=0.8.

rs_ID	r²[population][source]
rs10160056	0.92[CHB][hapmap]
rs10736365	0.87[EUR][1000 genomes]
rs10788619	0.88[EUR][1000 genomes]
rs10788620	0.92[AMR][1000 genomes];1.00[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs10788625	0.92[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs10887847	0.81[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs10887865	0.95[AFR][1000 genomes];0.98[AMR][1000 genomes];1.00[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs10887871	1.00[CHB][hapmap];0.81[JPT][hapmap];0.96[AMR][1000 genomes];1.00[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs10887872	0.83[EUR][1000 genomes]
rs10887873	1.00[CHB][hapmap];0.96[AMR][1000 genomes];1.00[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs11202815	0.85[EUR][1000 genomes]
rs11202832	1.00[CHB][hapmap];0.81[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs14073	1.00[CHB][hapmap];0.98[AMR][1000 genomes];1.00[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs1538822	0.81[CHB][hapmap]
rs1870143	1.00[CHB][hapmap];0.93[JPT][hapmap];0.81[YRI][hapmap];0.96[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1870144	1.00[CHB][hapmap];0.93[JPT][hapmap];0.90[YRI][hapmap];0.96[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs3195896	1.00[CHB][hapmap];0.96[AMR][1000 genomes];1.00[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs3195899	1.00[CHB][hapmap];0.94[AMR][1000 genomes];0.96[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs3195900	0.94[AMR][1000 genomes];0.96[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs4934134	0.84[CHB][hapmap]
rs6585989	1.00[CHB][hapmap]
rs6585994	0.90[CHB][hapmap];0.93[JPT][hapmap];0.98[ASN][1000 genomes]
rs66586255	0.96[AFR][1000 genomes];0.86[AMR][1000 genomes];0.88[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7071752	0.81[CHB][hapmap]
rs7074356	0.90[CHB][hapmap];0.83[ASN][1000 genomes]
rs7097080	0.90[CHB][hapmap]
rs7898558	1.00[CHB][hapmap];0.84[ASN][1000 genomes]
rs7898568	0.84[ASN][1000 genomes]
rs7907224	1.00[CHB][hapmap]
rs8735	1.00[CHB][hapmap];0.93[JPT][hapmap];1.00[YRI][hapmap];0.98[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]

rSNP related genes

Symbol	Regulation type
FAM213A	RNA binding protein mediated regulation

rSNP related regulatory elements

Proximal transcriptional regulation

Distal transcriptional regulation

Post-transcriptional regulation:within mature miRNA

Post-transcriptional regulation: associated with RNA binding protein

eQTL evidence (count: 0)