SNP Report

Basic Infomation

Name	rs11264367 dbSNP
Location	chr:1,155337338
Allele	T/C

LD-proxy of rSNPs(r²>0.8) (count: 59)

The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r² >=0.8.

rs_ID	r²[population][source]
rs10752611	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap]
rs10796943	0.96[CEU][hapmap];1.00[CHB][hapmap];1.00[YRI][hapmap];0.84[AFR][1000 genomes];0.83[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs10796945	0.92[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.87[EUR][1000 genomes]
rs10796946	0.84[AFR][1000 genomes];0.83[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs10908463	0.91[CEU][hapmap];1.00[CHB][hapmap];0.89[JPT][hapmap]
rs10908465	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.84[AFR][1000 genomes];0.86[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs10908466	0.84[AFR][1000 genomes];0.83[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs10908467	0.86[EUR][1000 genomes]
rs10908469	0.96[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap]
rs10908470	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap]
rs11264359	0.84[CEU][hapmap];0.95[CHB][hapmap];0.91[JPT][hapmap]
rs11264361	0.88[CEU][hapmap];1.00[CHB][hapmap];0.91[JPT][hapmap]
rs11264362	0.92[ASN][1000 genomes]
rs11264363	0.95[CHB][hapmap];1.00[JPT][hapmap];0.93[ASN][1000 genomes]
rs11264365	0.83[EUR][1000 genomes]
rs11264366	0.95[AMR][1000 genomes];0.99[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs11264369	0.96[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.86[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs11264370	0.92[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs11264371	0.84[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap]
rs11264372	0.84[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.80[AFR][1000 genomes]
rs11264374	0.80[AFR][1000 genomes];0.81[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs11264375	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.86[EUR][1000 genomes]
rs11264380	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap]
rs11264381	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap]
rs12021631	0.80[AMR][1000 genomes];0.94[ASN][1000 genomes]
rs12024696	0.94[AMR][1000 genomes];0.91[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs12025532	0.84[AMR][1000 genomes];0.91[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs12026638	0.92[CEU][hapmap];0.95[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.86[AFR][1000 genomes];0.83[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs12028416	0.86[AFR][1000 genomes];0.82[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs12037824	0.84[AFR][1000 genomes]
rs12041534	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.87[EUR][1000 genomes]
rs12049455	0.91[AMR][1000 genomes];0.87[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs12067371	0.87[EUR][1000 genomes]
rs12079134	0.96[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.80[EUR][1000 genomes]
rs12081067	0.85[AFR][1000 genomes];0.89[AMR][1000 genomes];0.91[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs12131079	0.95[ASN][1000 genomes]
rs12143948	1.00[CHB][hapmap];1.00[JPT][hapmap]
rs12239100	0.82[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs12239114	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.96[AFR][1000 genomes];0.98[AMR][1000 genomes];0.94[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs12724079	1.00[CHB][hapmap];1.00[JPT][hapmap]
rs12746592	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap]
rs1325908	1.00[CHB][hapmap];1.00[JPT][hapmap]
rs1360554	1.00[CHB][hapmap];1.00[JPT][hapmap]
rs1886905	0.96[CEU][hapmap];0.84[CHB][hapmap];0.91[JPT][hapmap]
rs2025669	0.89[AFR][1000 genomes];0.90[AMR][1000 genomes];0.94[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs2297480	0.88[CEU][hapmap];0.89[CHB][hapmap]
rs35615695	1.00[CHB][hapmap];1.00[JPT][hapmap]
rs4492610	0.87[AFR][1000 genomes];0.86[AMR][1000 genomes];0.81[ASN][1000 genomes]
rs5005770	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.96[AFR][1000 genomes];0.98[AMR][1000 genomes];0.97[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs56675301	0.90[AFR][1000 genomes];0.88[AMR][1000 genomes];0.92[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs6677385	0.84[EUR][1000 genomes]
rs6684889	0.89[CHB][hapmap];0.90[JPT][hapmap]
rs6688636	1.00[CHB][hapmap];1.00[JPT][hapmap]
rs6692183	0.83[EUR][1000 genomes]
rs66923802	0.99[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs6696888	1.00[CHB][hapmap];1.00[JPT][hapmap]
rs71517782	0.96[AFR][1000 genomes];0.98[AMR][1000 genomes];0.96[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs7416976	0.91[AFR][1000 genomes];0.89[AMR][1000 genomes];0.91[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs7556102	0.85[CHB][hapmap];0.92[JPT][hapmap];0.85[ASN][1000 genomes]

rSNP related genes

Symbol	Regulation type
ASH1L	RNA binding protein mediated regulation

rSNP related regulatory elements

Proximal transcriptional regulation

Distal transcriptional regulation

Post-transcriptional regulation:within mature miRNA

Post-transcriptional regulation: associated with RNA binding protein

eQTL evidence (count: 0)