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rVarBase
SNP Report
Basic Infomation
Name
rs4492610  
dbSNP
Location
chr:1,155328396
Allele
G/A
LD-proxy of rSNPs(r
2
>0.8) (count: 11)
The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r
2
>=0.8.
rs_ID
r
2
[population][source]
rs11264362
0.81[ASN][1000 genomes]
rs11264366
0.81[AMR][1000 genomes];0.85[ASN][1000 genomes]
rs11264367
0.87[AFR][1000 genomes];0.86[AMR][1000 genomes];0.81[ASN][1000 genomes]
rs12024696
0.81[ASN][1000 genomes]
rs12131079
0.81[ASN][1000 genomes]
rs12239114
0.88[AFR][1000 genomes];0.83[AMR][1000 genomes];0.81[ASN][1000 genomes]
rs5005770
0.85[AFR][1000 genomes];0.83[AMR][1000 genomes];0.83[ASN][1000 genomes]
rs56675301
0.83[AFR][1000 genomes]
rs66923802
0.88[AFR][1000 genomes];0.86[AMR][1000 genomes];0.83[ASN][1000 genomes]
rs71517782
0.85[AFR][1000 genomes];0.83[AMR][1000 genomes];0.83[ASN][1000 genomes]
rs7416976
0.84[AFR][1000 genomes]
rSNP related genes
Symbol
Regulation type
ASH1L
RNA binding protein mediated regulation
rSNP related regulatory elements
Proximal transcriptional regulation
Distal transcriptional regulation
Post-transcriptional regulation:within mature miRNA
Post-transcriptional regulation: associated with RNA binding protein
eQTL evidence (count: 0)