SNP Report

Basic Infomation

Name	rs12025532 dbSNP
Location	chr:1,155369302
Allele	C/T

LD-proxy of rSNPs(r²>0.8) (count: 49)

The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r² >=0.8.

rs_ID	r²[population][source]
rs10752611	0.86[AMR][1000 genomes];0.81[EUR][1000 genomes]
rs10796943	0.96[AMR][1000 genomes];0.92[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs10796944	0.88[AMR][1000 genomes]
rs10796945	0.86[AMR][1000 genomes];0.94[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs10796946	0.96[AMR][1000 genomes];0.94[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs10908465	0.99[AMR][1000 genomes];0.95[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs10908466	0.96[AMR][1000 genomes];0.94[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs10908467	0.89[AMR][1000 genomes];0.92[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs10908469	0.81[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs10908470	0.86[AMR][1000 genomes]
rs10908471	0.83[AMR][1000 genomes]
rs11264363	0.80[ASN][1000 genomes]
rs11264366	0.80[AMR][1000 genomes];0.91[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs11264367	0.84[AMR][1000 genomes];0.91[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs11264369	0.88[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs11264370	0.88[AMR][1000 genomes];0.98[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs11264371	0.88[AMR][1000 genomes];0.81[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs11264372	0.93[AMR][1000 genomes];0.81[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs11264374	0.94[AMR][1000 genomes];0.94[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs11264375	0.90[AMR][1000 genomes];0.92[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs11264380	0.80[AMR][1000 genomes];0.81[EUR][1000 genomes]
rs11264381	0.87[AMR][1000 genomes];0.81[EUR][1000 genomes]
rs12021631	0.81[ASN][1000 genomes]
rs12024696	0.81[AMR][1000 genomes];0.85[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs12026638	0.96[AMR][1000 genomes];0.94[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs12028416	0.95[AMR][1000 genomes];0.94[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs12037824	0.93[AMR][1000 genomes];0.81[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs12041534	0.92[AMR][1000 genomes];0.93[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs12049455	0.82[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs12067371	0.85[AMR][1000 genomes];0.94[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs12079134	0.87[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs12081067	0.93[AMR][1000 genomes];0.95[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs12131079	0.82[ASN][1000 genomes]
rs12239100	0.87[AFR][1000 genomes];0.98[AMR][1000 genomes];0.95[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs12239114	0.82[AMR][1000 genomes];0.85[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs12724079	0.84[ASN][1000 genomes]
rs12746592	0.93[AMR][1000 genomes];0.84[EUR][1000 genomes]
rs1325908	0.84[ASN][1000 genomes]
rs2025669	0.94[AMR][1000 genomes];0.97[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs5005770	0.87[AMR][1000 genomes];0.91[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs5020058	0.81[AMR][1000 genomes]
rs56675301	0.96[AMR][1000 genomes];0.99[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs6670014	0.82[AMR][1000 genomes];0.80[EUR][1000 genomes]
rs6684889	0.84[ASN][1000 genomes]
rs66923802	0.84[AMR][1000 genomes];0.91[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs71517782	0.87[AMR][1000 genomes];0.89[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs7411786	0.81[EUR][1000 genomes]
rs7416976	0.93[AMR][1000 genomes];0.95[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs7556102	0.95[ASN][1000 genomes]

rSNP related genes

Symbol	Regulation type
ASH1L-IT1	Proximal transcriptional regulation
ASH1L	RNA binding protein mediated regulation

rSNP related regulatory elements

Proximal transcriptional regulation

Distal transcriptional regulation

Post-transcriptional regulation:within mature miRNA

Post-transcriptional regulation: associated with RNA binding protein

eQTL evidence (count: 0)