SNP Report
Basic Infomation
| Name | rs6670014 dbSNP |
|---|---|
| Location | chr:1,155360578 |
| Allele | G/A |
LD-proxy of rSNPs(r2>0.8) (count: 18)
The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r2 >=0.8.
| rs_ID | r2[population][source] |
|---|---|
| rs10796943 | 0.80[AMR][1000 genomes] |
| rs10796945 | 0.88[AMR][1000 genomes] |
| rs10796946 | 0.80[AMR][1000 genomes] |
| rs10908465 | 0.83[AMR][1000 genomes] |
| rs10908466 | 0.80[AMR][1000 genomes] |
| rs10908467 | 0.85[AMR][1000 genomes] |
| rs11264370 | 0.81[AFR][1000 genomes];0.93[AMR][1000 genomes];0.81[EUR][1000 genomes] |
| rs11264371 | 0.82[AMR][1000 genomes] |
| rs11264375 | 0.84[AMR][1000 genomes] |
| rs12025532 | 0.82[AMR][1000 genomes];0.80[EUR][1000 genomes] |
| rs12026638 | 0.80[AMR][1000 genomes] |
| rs12041534 | 0.85[AMR][1000 genomes] |
| rs12067371 | 0.87[AMR][1000 genomes] |
| rs12079134 | 0.83[AMR][1000 genomes] |
| rs12081067 | 0.84[AMR][1000 genomes];0.82[EUR][1000 genomes] |
| rs2025669 | 0.83[AMR][1000 genomes];0.80[EUR][1000 genomes] |
| rs56675301 | 0.85[AMR][1000 genomes];0.81[EUR][1000 genomes] |
| rs7416976 | 0.84[AMR][1000 genomes];0.82[EUR][1000 genomes] |
rSNP related genes
| Symbol | Regulation type |
|---|---|
| ASH1L | RNA binding protein mediated regulation |
rSNP related regulatory elements
Proximal transcriptional regulation
Distal transcriptional regulation
Post-transcriptional regulation:within mature miRNA
Post-transcriptional regulation: associated with RNA binding protein
eQTL evidence (count: 0)
Copyright: Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences Feedback
Last update: March 26, 2014