SNP Report

Basic Infomation

Name	rs11174370 dbSNP
Location	chr:12,40330822
Allele	C/T

LD-proxy of rSNPs(r²>0.8) (count: 46)

The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r² >=0.8.

rs_ID	r²[population][source]
rs10506138	1.00[CHB][hapmap];0.88[GIH][hapmap];0.82[MKK][hapmap];0.86[ASN][1000 genomes]
rs1086490	0.81[CEU][hapmap];1.00[JPT][hapmap]
rs10877779	1.00[CHB][hapmap];0.86[ASN][1000 genomes]
rs10877837	1.00[CEU][hapmap];1.00[JPT][hapmap];0.89[EUR][1000 genomes]
rs11173671	1.00[CHD][hapmap]
rs11173862	1.00[ASW][hapmap]
rs11174266	0.86[ASN][1000 genomes]
rs11174285	1.00[CHB][hapmap];0.86[ASN][1000 genomes]
rs11174292	1.00[CHB][hapmap];0.88[GIH][hapmap];0.82[MKK][hapmap];0.86[ASN][1000 genomes]
rs11174293	1.00[CHB][hapmap];0.86[ASN][1000 genomes]
rs11174427	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[AFR][1000 genomes];0.89[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs11174532	0.83[EUR][1000 genomes]
rs11174533	0.88[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs11514248	0.95[AFR][1000 genomes];1.00[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs11564133	1.00[JPT][hapmap]
rs11564139	1.00[JPT][hapmap]
rs11564160	1.00[JPT][hapmap]
rs11564221	1.00[ASW][hapmap];1.00[CEU][hapmap];1.00[GIH][hapmap];0.86[LWK][hapmap];1.00[MEX][hapmap];0.96[MKK][hapmap];1.00[TSI][hapmap];0.90[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs11564223	1.00[JPT][hapmap]
rs11564282	0.81[CEU][hapmap];1.00[JPT][hapmap]
rs12312535	1.00[JPT][hapmap]
rs12371119	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.89[AFR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12810368	1.00[JPT][hapmap]
rs12827948	1.00[JPT][hapmap]
rs1482282	1.00[JPT][hapmap]
rs17442108	1.00[JPT][hapmap]
rs17442304	1.00[JPT][hapmap]
rs17442469	1.00[JPT][hapmap]
rs17461082	1.00[JPT][hapmap]
rs17483628	1.00[JPT][hapmap]
rs17559478	1.00[JPT][hapmap]
rs2046929	1.00[JPT][hapmap]
rs28370607	1.00[CEU][hapmap];1.00[JPT][hapmap];0.90[AFR][1000 genomes];0.95[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs28370611	0.80[AFR][1000 genomes];0.89[EUR][1000 genomes]
rs28370644	1.00[JPT][hapmap]
rs28370654	1.00[JPT][hapmap]
rs28370656	1.00[JPT][hapmap]
rs28370659	1.00[JPT][hapmap]
rs28370681	1.00[JPT][hapmap]
rs28370805	1.00[JPT][hapmap]
rs4128689	1.00[CHB][hapmap]
rs4399379	1.00[JPT][hapmap]
rs7311756	1.00[GIH][hapmap];1.00[MEX][hapmap];0.87[MKK][hapmap]
rs74089317	0.86[ASN][1000 genomes]
rs7969495	1.00[JPT][hapmap]
rs992851	1.00[ASW][hapmap];0.81[CEU][hapmap];0.88[GIH][hapmap];1.00[JPT][hapmap];0.96[MKK][hapmap];0.90[TSI][hapmap]

rSNP related genes

Symbol	Regulation type
SLC2A13	RNA binding protein mediated regulation

rSNP related regulatory elements

Proximal transcriptional regulation

Distal transcriptional regulation

Post-transcriptional regulation:within mature miRNA

Post-transcriptional regulation: associated with RNA binding protein

eQTL evidence (count: 1)