SNP Report

Basic Infomation

Name	rs28370607 dbSNP
Location	chr:12,40351557
Allele	T/C

LD-proxy of rSNPs(r²>0.8) (count: 40)

The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r² >=0.8.

rs_ID	r²[population][source]
rs10506145	1.00[JPT][hapmap]
rs1086490	0.83[CEU][hapmap]
rs10877837	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11174370	1.00[CEU][hapmap];1.00[JPT][hapmap];0.90[AFR][1000 genomes];0.95[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs11174427	1.00[CEU][hapmap];0.90[AFR][1000 genomes];1.00[EUR][1000 genomes]
rs11174532	0.87[EUR][1000 genomes]
rs11174533	0.92[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs11174536	0.80[EUR][1000 genomes]
rs11514248	0.85[AFR][1000 genomes];0.89[EUR][1000 genomes]
rs11564221	1.00[CEU][hapmap];0.82[AFR][1000 genomes];0.95[AMR][1000 genomes];0.98[EUR][1000 genomes]
rs11564223	0.82[ASN][1000 genomes]
rs11564282	0.83[CEU][hapmap];0.85[EUR][1000 genomes]
rs12312535	0.82[ASN][1000 genomes]
rs12371119	1.00[CEU][hapmap];0.80[AFR][1000 genomes];0.89[EUR][1000 genomes]
rs12810368	1.00[JPT][hapmap]
rs12827948	1.00[JPT][hapmap]
rs1482282	1.00[JPT][hapmap]
rs17442108	1.00[JPT][hapmap]
rs17442469	0.82[ASN][1000 genomes]
rs17442742	1.00[JPT][hapmap]
rs17442749	1.00[JPT][hapmap]
rs17442853	1.00[JPT][hapmap]
rs17458396	1.00[JPT][hapmap]
rs17461082	1.00[JPT][hapmap]
rs17483628	1.00[JPT][hapmap];0.82[ASN][1000 genomes]
rs17518057	1.00[JPT][hapmap]
rs2046929	0.82[ASN][1000 genomes]
rs2404346	0.82[ASN][1000 genomes]
rs2404574	1.00[JPT][hapmap]
rs28370611	0.90[AFR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs28370644	0.82[ASN][1000 genomes]
rs28370654	0.82[ASN][1000 genomes]
rs28370659	0.82[ASN][1000 genomes]
rs28370681	0.82[ASN][1000 genomes]
rs28370805	1.00[JPT][hapmap]
rs28740188	0.82[ASN][1000 genomes]
rs55707305	0.82[ASN][1000 genomes]
rs73280629	0.86[EUR][1000 genomes]
rs7969495	1.00[JPT][hapmap];0.82[ASN][1000 genomes]
rs992851	0.83[CEU][hapmap];0.85[EUR][1000 genomes]

rSNP related genes

Symbol	Regulation type
SLC2A13	RNA binding protein mediated regulation

rSNP related regulatory elements

Proximal transcriptional regulation

Distal transcriptional regulation

Post-transcriptional regulation:within mature miRNA

Post-transcriptional regulation: associated with RNA binding protein

eQTL evidence (count: 0)