SNP Report
Basic Infomation
| Name | rs28370611 dbSNP |
|---|---|
| Location | chr:12,40355093 |
| Allele | C/A |
LD-proxy of rSNPs(r2>0.8) (count: 26)
The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r2 >=0.8.
| rs_ID | r2[population][source] |
|---|---|
| rs10877837 | 1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes] |
| rs11174370 | 0.80[AFR][1000 genomes];0.89[EUR][1000 genomes] |
| rs11174427 | 0.80[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes] |
| rs11174532 | 0.84[AMR][1000 genomes];0.87[EUR][1000 genomes] |
| rs11174533 | 0.87[AFR][1000 genomes];0.93[EUR][1000 genomes] |
| rs11174536 | 0.80[EUR][1000 genomes] |
| rs11514248 | 1.00[AMR][1000 genomes];0.89[EUR][1000 genomes] |
| rs11564221 | 0.91[AFR][1000 genomes];0.98[EUR][1000 genomes] |
| rs11564223 | 0.82[ASN][1000 genomes] |
| rs11564282 | 0.85[EUR][1000 genomes] |
| rs12312535 | 0.82[ASN][1000 genomes] |
| rs12371119 | 0.96[AMR][1000 genomes];0.89[EUR][1000 genomes] |
| rs17442469 | 0.82[ASN][1000 genomes] |
| rs17483628 | 0.82[ASN][1000 genomes] |
| rs2046929 | 0.82[ASN][1000 genomes] |
| rs2404346 | 0.82[ASN][1000 genomes] |
| rs28370607 | 0.90[AFR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes] |
| rs28370644 | 0.82[ASN][1000 genomes] |
| rs28370654 | 0.82[ASN][1000 genomes] |
| rs28370659 | 0.82[ASN][1000 genomes] |
| rs28370681 | 0.82[ASN][1000 genomes] |
| rs28740188 | 0.82[ASN][1000 genomes] |
| rs55707305 | 0.82[ASN][1000 genomes] |
| rs73280629 | 0.86[EUR][1000 genomes] |
| rs7969495 | 0.82[ASN][1000 genomes] |
| rs992851 | 0.85[EUR][1000 genomes] |
rSNP related genes
| Symbol | Regulation type |
|---|---|
| SLC2A13 | RNA binding protein mediated regulation |
rSNP related regulatory elements
Proximal transcriptional regulation
Distal transcriptional regulation
Post-transcriptional regulation:within mature miRNA
Post-transcriptional regulation: associated with RNA binding protein
eQTL evidence (count: 0)
Copyright: Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences Feedback
Last update: March 26, 2014