SNP Report
Basic Infomation
| Name | rs17461082 dbSNP |
|---|---|
| Location | chr:12,40476438 |
| Allele | C/T |
LD-proxy of rSNPs(r2>0.8) (count: 33)
The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r2 >=0.8.
| rs_ID | r2[population][source] |
|---|---|
| rs10506145 | 1.00[JPT][hapmap] |
| rs11174370 | 1.00[JPT][hapmap] |
| rs11564133 | 1.00[CHB][hapmap];0.87[ASN][1000 genomes] |
| rs11564139 | 1.00[CHB][hapmap] |
| rs11564160 | 1.00[CHB][hapmap] |
| rs11564194 | 1.00[JPT][hapmap] |
| rs11564223 | 1.00[CHB][hapmap] |
| rs12312535 | 1.00[CHB][hapmap] |
| rs12810368 | 1.00[JPT][hapmap] |
| rs12827948 | 1.00[JPT][hapmap] |
| rs1482282 | 1.00[CHB][hapmap];1.00[JPT][hapmap];0.87[ASN][1000 genomes] |
| rs17442108 | 1.00[CHB][hapmap];1.00[JPT][hapmap] |
| rs17442304 | 1.00[CHB][hapmap] |
| rs17442469 | 1.00[CHB][hapmap] |
| rs17442742 | 1.00[JPT][hapmap] |
| rs17442749 | 1.00[JPT][hapmap] |
| rs17442853 | 1.00[JPT][hapmap] |
| rs17458396 | 1.00[JPT][hapmap];0.87[ASN][1000 genomes] |
| rs17458403 | 0.87[ASN][1000 genomes] |
| rs17483628 | 1.00[CHB][hapmap];1.00[JPT][hapmap] |
| rs17518057 | 1.00[JPT][hapmap] |
| rs2046929 | 1.00[CHB][hapmap] |
| rs2404574 | 1.00[JPT][hapmap] |
| rs2708404 | 1.00[JPT][hapmap] |
| rs28370607 | 1.00[JPT][hapmap] |
| rs28370644 | 1.00[CHB][hapmap] |
| rs28370654 | 1.00[CHB][hapmap] |
| rs28370656 | 1.00[CHB][hapmap] |
| rs28370659 | 1.00[CHB][hapmap] |
| rs28370681 | 1.00[CHB][hapmap] |
| rs28370805 | 1.00[JPT][hapmap];1.00[EUR][1000 genomes] |
| rs7305377 | 0.87[ASN][1000 genomes] |
| rs7969495 | 1.00[CHB][hapmap];1.00[JPT][hapmap] |
rSNP related genes
| Symbol | Regulation type |
|---|---|
| SLC2A13 | RNA binding protein mediated regulation |
rSNP related regulatory elements
Proximal transcriptional regulation
Distal transcriptional regulation
Post-transcriptional regulation:within mature miRNA
Post-transcriptional regulation: associated with RNA binding protein
eQTL evidence (count: 0)
Copyright: Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences Feedback
Last update: March 26, 2014