SNP Report
Basic Infomation
| Name | rs4399379 dbSNP |
|---|---|
| Location | chr:12,40186600 |
| Allele | T/G |
LD-proxy of rSNPs(r2>0.8) (count: 41)
The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r2 >=0.8.
| rs_ID | r2[population][source] |
|---|---|
| rs10083196 | 1.00[CEU][hapmap] |
| rs10444571 | 1.00[CEU][hapmap] |
| rs10444572 | 1.00[CEU][hapmap] |
| rs10784058 | 1.00[CEU][hapmap] |
| rs1086490 | 1.00[JPT][hapmap] |
| rs10877837 | 1.00[JPT][hapmap] |
| rs11174370 | 1.00[JPT][hapmap] |
| rs11564139 | 1.00[JPT][hapmap] |
| rs11564282 | 1.00[JPT][hapmap] |
| rs11833798 | 1.00[CEU][hapmap] |
| rs12371119 | 1.00[JPT][hapmap] |
| rs12810368 | 1.00[JPT][hapmap] |
| rs12827948 | 1.00[JPT][hapmap] |
| rs17559478 | 1.00[JPT][hapmap] |
| rs4238071 | 1.00[CEU][hapmap] |
| rs4238077 | 0.82[CEU][hapmap] |
| rs4238078 | 1.00[CEU][hapmap] |
| rs4268570 | 1.00[CEU][hapmap] |
| rs4334098 | 1.00[CEU][hapmap] |
| rs4334099 | 1.00[CEU][hapmap] |
| rs4427625 | 1.00[CEU][hapmap] |
| rs4435073 | 1.00[CEU][hapmap] |
| rs4583047 | 1.00[CEU][hapmap] |
| rs4639999 | 1.00[CEU][hapmap] |
| rs4767953 | 1.00[CEU][hapmap] |
| rs4768181 | 1.00[CEU][hapmap] |
| rs4768182 | 1.00[CEU][hapmap] |
| rs6581325 | 1.00[CEU][hapmap] |
| rs6581336 | 1.00[CEU][hapmap] |
| rs6581338 | 1.00[CEU][hapmap] |
| rs7133037 | 1.00[CEU][hapmap] |
| rs7299595 | 1.00[CEU][hapmap] |
| rs7300946 | 1.00[CEU][hapmap] |
| rs7310917 | 1.00[CEU][hapmap] |
| rs7956254 | 1.00[CEU][hapmap] |
| rs7961216 | 1.00[CEU][hapmap] |
| rs7969296 | 1.00[CEU][hapmap] |
| rs7973782 | 1.00[CEU][hapmap] |
| rs7975209 | 1.00[CEU][hapmap] |
| rs9645805 | 1.00[CEU][hapmap] |
| rs992851 | 1.00[JPT][hapmap] |
rSNP related genes
| Symbol | Regulation type |
|---|---|
| C12orf40 | RNA binding protein mediated regulation |
| SLC2A13 | RNA binding protein mediated regulation |
rSNP related regulatory elements
Proximal transcriptional regulation
Distal transcriptional regulation
Post-transcriptional regulation:within mature miRNA
Post-transcriptional regulation: associated with RNA binding protein
eQTL evidence (count: 0)
Copyright: Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences Feedback
Last update: March 26, 2014