SNP Report

Basic Infomation

Name	rs9645805 dbSNP
Location	chr:12,40181778
Allele	T/C

LD-proxy of rSNPs(r²>0.8) (count: 71)

The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r² >=0.8.

rs_ID	r²[population][source]
rs10083196	1.00[CEU][hapmap]
rs10444571	1.00[CEU][hapmap];0.95[EUR][1000 genomes]
rs10444572	1.00[CEU][hapmap];0.95[EUR][1000 genomes]
rs10747879	0.95[EUR][1000 genomes]
rs10784058	1.00[CEU][hapmap];0.95[EUR][1000 genomes]
rs11833798	1.00[CEU][hapmap]
rs17559478	1.00[JPT][hapmap]
rs4238071	1.00[CEU][hapmap];0.95[EUR][1000 genomes]
rs4238074	0.95[EUR][1000 genomes]
rs4238075	0.95[EUR][1000 genomes]
rs4238077	0.82[CEU][hapmap];0.95[EUR][1000 genomes]
rs4238078	1.00[CEU][hapmap];1.00[JPT][hapmap];0.83[YRI][hapmap];0.83[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4267135	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4268570	1.00[CEU][hapmap];0.95[EUR][1000 genomes]
rs4321021	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4322462	0.95[EUR][1000 genomes]
rs4334097	0.95[EUR][1000 genomes]
rs4334098	1.00[CEU][hapmap]
rs4334099	1.00[CEU][hapmap]
rs4391873	0.95[EUR][1000 genomes]
rs4397917	0.95[EUR][1000 genomes]
rs4399379	1.00[CEU][hapmap]
rs4426190	0.89[EUR][1000 genomes]
rs4427625	1.00[CEU][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4435073	1.00[CEU][hapmap]
rs4447240	0.95[EUR][1000 genomes]
rs4488272	0.95[EUR][1000 genomes]
rs4511345	0.95[EUR][1000 genomes]
rs4529945	0.95[EUR][1000 genomes]
rs4533100	0.95[EUR][1000 genomes]
rs4544077	0.95[EUR][1000 genomes]
rs4576894	0.86[EUR][1000 genomes]
rs4583047	1.00[CEU][hapmap];0.95[EUR][1000 genomes]
rs4639999	1.00[CEU][hapmap];1.00[JPT][hapmap];0.83[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4767953	1.00[CEU][hapmap];0.95[EUR][1000 genomes]
rs4768178	0.95[EUR][1000 genomes]
rs4768180	0.95[EUR][1000 genomes]
rs4768181	1.00[CEU][hapmap];1.00[JPT][hapmap];0.83[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4768182	1.00[CEU][hapmap];1.00[JPT][hapmap];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs56221715	0.89[ASN][1000 genomes]
rs60002366	0.89[ASN][1000 genomes]
rs6581321	0.95[EUR][1000 genomes]
rs6581325	1.00[CEU][hapmap];0.95[EUR][1000 genomes]
rs6581326	0.95[EUR][1000 genomes]
rs6581336	1.00[CEU][hapmap];0.83[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs6581337	0.95[EUR][1000 genomes]
rs6581338	1.00[CEU][hapmap];1.00[JPT][hapmap];0.83[YRI][hapmap];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6581346	1.00[EUR][1000 genomes]
rs66924731	0.89[ASN][1000 genomes]
rs67574032	0.89[ASN][1000 genomes]
rs7133037	1.00[CEU][hapmap];0.85[EUR][1000 genomes]
rs7135047	0.95[EUR][1000 genomes]
rs7297063	0.95[EUR][1000 genomes]
rs7299595	1.00[CEU][hapmap];0.95[EUR][1000 genomes]
rs7300946	1.00[CEU][hapmap];0.95[EUR][1000 genomes]
rs7302571	0.95[EUR][1000 genomes]
rs7303581	0.95[EUR][1000 genomes]
rs73103008	0.89[ASN][1000 genomes]
rs73103024	0.89[ASN][1000 genomes]
rs73103034	0.89[ASN][1000 genomes]
rs73104960	0.89[ASN][1000 genomes]
rs73104964	0.89[ASN][1000 genomes]
rs7310917	1.00[CEU][hapmap];0.81[EUR][1000 genomes]
rs73274668	0.89[ASN][1000 genomes]
rs73276518	0.89[ASN][1000 genomes]
rs74086925	0.89[ASN][1000 genomes]
rs7956254	1.00[CEU][hapmap];0.95[EUR][1000 genomes]
rs7961216	1.00[CEU][hapmap];0.95[EUR][1000 genomes]
rs7969296	1.00[CEU][hapmap];1.00[JPT][hapmap];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7973782	1.00[CEU][hapmap];0.95[EUR][1000 genomes]
rs7975209	1.00[CEU][hapmap];1.00[JPT][hapmap];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]

rSNP related genes

Symbol	Regulation type
C12orf40	RNA binding protein mediated regulation
SLC2A13	RNA binding protein mediated regulation

rSNP related regulatory elements

Proximal transcriptional regulation

Distal transcriptional regulation

Post-transcriptional regulation:within mature miRNA

Post-transcriptional regulation: associated with RNA binding protein

eQTL evidence (count: 0)