SNP Report
Name | rs8041397   dbSNP |
---|---|
Location | chr:15,91035064 |
Allele | G/A |
The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r2 >=0.8.
rs_ID | r2[population][source] |
---|---|
rs1008507 | 1.00[CEU][hapmap];0.87[AMR][1000 genomes];0.92[EUR][1000 genomes] |
rs10520689 | 0.85[CEU][hapmap] |
rs10852132 | 0.85[AFR][1000 genomes];0.94[EUR][1000 genomes];0.97[ASN][1000 genomes] |
rs11073928 | 0.82[AFR][1000 genomes];0.89[AMR][1000 genomes];0.91[EUR][1000 genomes] |
rs11073929 | 1.00[CEU][hapmap];0.92[EUR][1000 genomes] |
rs11629883 | 0.85[CEU][hapmap];0.91[CHB][hapmap];0.86[JPT][hapmap];0.83[AFR][1000 genomes];1.00[AMR][1000 genomes];0.98[EUR][1000 genomes];0.97[ASN][1000 genomes] |
rs11631263 | 1.00[CEU][hapmap] |
rs11631269 | 1.00[CEU][hapmap];0.91[CHB][hapmap];0.86[JPT][hapmap];0.81[AFR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs11632722 | 0.85[CEU][hapmap] |
rs11852792 | 0.82[EUR][1000 genomes] |
rs11853611 | 0.85[CEU][hapmap] |
rs11854320 | 0.85[CEU][hapmap] |
rs12161988 | 0.85[CEU][hapmap];0.82[EUR][1000 genomes] |
rs12437506 | 0.82[CHB][hapmap] |
rs12437529 | 0.83[CHB][hapmap] |
rs12438963 | 0.81[CHB][hapmap] |
rs12439535 | 0.83[CHB][hapmap] |
rs12439604 | 0.83[CHB][hapmap] |
rs12439754 | 0.83[CHB][hapmap] |
rs12441335 | 0.82[CHB][hapmap] |
rs12441630 | 0.83[CHB][hapmap] |
rs12441871 | 0.85[CEU][hapmap];0.90[CHB][hapmap] |
rs12912909 | 0.85[CEU][hapmap] |
rs16944179 | 0.85[CEU][hapmap] |
rs16944473 | 0.88[EUR][1000 genomes] |
rs16944485 | 1.00[CEU][hapmap];0.91[CHB][hapmap];0.85[JPT][hapmap];0.96[AFR][1000 genomes];1.00[AMR][1000 genomes];0.98[EUR][1000 genomes];0.94[ASN][1000 genomes] |
rs16944527 | 1.00[CEU][hapmap];0.91[CHB][hapmap];0.86[JPT][hapmap];0.98[AFR][1000 genomes];1.00[AMR][1000 genomes];0.98[EUR][1000 genomes];0.98[ASN][1000 genomes] |
rs16944545 | 0.85[CEU][hapmap] |
rs16974215 | 1.00[CEU][hapmap];0.91[CHB][hapmap];0.85[JPT][hapmap];0.85[AFR][1000 genomes];0.97[EUR][1000 genomes];0.98[ASN][1000 genomes] |
rs2158407 | 1.00[CEU][hapmap];0.87[AMR][1000 genomes];0.92[EUR][1000 genomes] |
rs2238326 | 0.83[CHB][hapmap] |
rs2283440 | 0.83[CHB][hapmap] |
rs2283446 | 0.82[CHB][hapmap] |
rs2301830 | 0.83[CHB][hapmap] |
rs2301831 | 0.83[CHB][hapmap] |
rs28534079 | 0.98[AFR][1000 genomes];1.00[AMR][1000 genomes];0.98[EUR][1000 genomes];0.90[ASN][1000 genomes] |
rs28629981 | 0.82[AFR][1000 genomes];0.97[EUR][1000 genomes];0.98[ASN][1000 genomes] |
rs28630708 | 0.91[EUR][1000 genomes] |
rs28672102 | 0.98[AFR][1000 genomes];1.00[AMR][1000 genomes];0.98[EUR][1000 genomes];0.99[ASN][1000 genomes] |
rs28685205 | 1.00[AFR][1000 genomes];0.80[AMR][1000 genomes];0.99[EUR][1000 genomes];0.98[ASN][1000 genomes] |
rs28691618 | 0.92[EUR][1000 genomes] |
rs28702574 | 0.86[AFR][1000 genomes];0.90[AMR][1000 genomes];0.90[EUR][1000 genomes];0.88[ASN][1000 genomes] |
rs28782602 | 0.84[AMR][1000 genomes];0.88[EUR][1000 genomes];0.86[ASN][1000 genomes] |
rs28863184 | 0.82[EUR][1000 genomes] |
rs3743412 | 0.83[CHB][hapmap] |
rs4280212 | 0.82[EUR][1000 genomes] |
rs4441248 | 0.82[EUR][1000 genomes] |
rs58714003 | 0.82[EUR][1000 genomes] |
rs62020738 | 0.87[EUR][1000 genomes] |
rs62021772 | 0.91[EUR][1000 genomes] |
rs62021773 | 0.90[EUR][1000 genomes] |
rs62021775 | 0.92[EUR][1000 genomes] |
rs6496679 | 1.00[CEU][hapmap];0.91[EUR][1000 genomes] |
rs6496680 | 1.00[CEU][hapmap];0.91[CHB][hapmap];0.85[JPT][hapmap];0.98[AFR][1000 genomes];0.80[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs7169522 | 0.92[EUR][1000 genomes] |
rs8027565 | 1.00[CEU][hapmap];0.87[AFR][1000 genomes];0.84[AMR][1000 genomes];0.92[EUR][1000 genomes] |
rs9944285 | 1.00[CEU][hapmap];0.91[CHB][hapmap];0.86[JPT][hapmap];0.99[AFR][1000 genomes];0.80[AMR][1000 genomes];0.94[EUR][1000 genomes];0.97[ASN][1000 genomes] |
Symbol | Regulation type |
---|---|
IQGAP1 | Proximal transcriptional regulation |
Copyright: Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences Feedback
Last update: March 26, 2014