SNP Report

Basic Infomation

Name	rs28629981 dbSNP
Location	chr:15,91031523
Allele	G/A

LD-proxy of rSNPs(r²>0.8) (count: 34)

The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r² >=0.8.

rs_ID	r²[population][source]
rs1008507	0.91[EUR][1000 genomes]
rs10852132	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes];0.97[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs11073928	0.91[EUR][1000 genomes]
rs11073929	0.91[EUR][1000 genomes]
rs11629883	0.97[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs11631269	0.87[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs11852792	0.81[EUR][1000 genomes]
rs12161988	0.81[EUR][1000 genomes]
rs16944473	0.87[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs16944485	0.97[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs16944527	0.80[AFR][1000 genomes];0.97[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs16974215	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2158407	0.91[EUR][1000 genomes]
rs28534079	0.80[AFR][1000 genomes];0.97[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs28630708	0.91[EUR][1000 genomes]
rs28672102	0.80[AFR][1000 genomes];0.97[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs28685205	0.82[AFR][1000 genomes];0.98[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs28691618	0.89[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs28702574	0.90[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs28782602	0.87[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs28863184	0.81[EUR][1000 genomes]
rs4280212	0.81[EUR][1000 genomes]
rs4441248	0.81[EUR][1000 genomes]
rs58714003	0.81[EUR][1000 genomes]
rs62020738	0.87[EUR][1000 genomes]
rs62021772	0.91[EUR][1000 genomes]
rs62021773	0.90[EUR][1000 genomes]
rs62021775	0.89[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs6496679	0.89[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs6496680	0.80[AFR][1000 genomes];0.98[AMR][1000 genomes];0.97[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs7169522	0.91[EUR][1000 genomes]
rs8027565	0.91[EUR][1000 genomes]
rs8041397	0.82[AFR][1000 genomes];0.97[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs9944285	0.81[AFR][1000 genomes];0.98[AMR][1000 genomes];0.93[EUR][1000 genomes];0.99[ASN][1000 genomes]

rSNP related genes

Symbol	Regulation type
IQGAP1	Distal transcriptional regulation

rSNP related regulatory elements

Proximal transcriptional regulation

Distal transcriptional regulation

Post-transcriptional regulation:within mature miRNA

Post-transcriptional regulation: associated with RNA binding protein

eQTL evidence (count: 0)