SNP Report

Basic Infomation

LD-proxy of rSNPs(r²>0.8) (count: 26)

The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r² >=0.8.

rs_ID	r²[population][source]
rs1008507	1.00[CEU][hapmap]
rs10520689	0.88[CEU][hapmap];1.00[CHB][hapmap]
rs11073929	1.00[CEU][hapmap]
rs11631269	0.88[CEU][hapmap]
rs11632722	0.88[CEU][hapmap]
rs11853611	0.88[CEU][hapmap]
rs11854320	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.83[AFR][1000 genomes];1.00[ASN][1000 genomes]
rs12161988	0.88[CEU][hapmap]
rs12441871	0.88[CEU][hapmap];0.94[EUR][1000 genomes]
rs12905843	0.92[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs12906346	0.87[AMR][1000 genomes];0.98[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs12912856	0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12912909	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.83[AFR][1000 genomes];0.97[ASN][1000 genomes]
rs12915045	0.88[CEU][hapmap]
rs16944179	1.00[CEU][hapmap]
rs16944485	0.88[CEU][hapmap]
rs16944527	0.88[CEU][hapmap]
rs16944545	0.88[CEU][hapmap]
rs16974215	0.88[CEU][hapmap]
rs2158407	1.00[CEU][hapmap]
rs36098687	0.83[AFR][1000 genomes];0.97[ASN][1000 genomes]
rs6496679	1.00[CEU][hapmap]
rs6496680	0.88[CEU][hapmap]
rs8027565	1.00[CEU][hapmap]
rs8041397	1.00[CEU][hapmap]
rs9944285	0.88[CEU][hapmap]

rSNP related genes

Symbol	Regulation type
NDUFA3P4	Proximal transcriptional regulation

rSNP related regulatory elements

eQTL evidence (count: 0)