SNP Report
Name | rs28662267   dbSNP |
---|---|
Location | chr:1,155680449 |
Allele | T/C |
The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r2 >=0.8.
rs_ID | r2[population][source] |
---|---|
rs10908479 | 0.82[EUR][1000 genomes];0.80[ASN][1000 genomes] |
rs10908480 | 0.82[AFR][1000 genomes];0.98[AMR][1000 genomes];0.95[EUR][1000 genomes];0.86[ASN][1000 genomes] |
rs10908481 | 0.94[AFR][1000 genomes];0.96[AMR][1000 genomes];0.93[EUR][1000 genomes];0.93[ASN][1000 genomes] |
rs10908482 | 0.93[ASN][1000 genomes] |
rs11264410 | 0.92[AMR][1000 genomes];0.89[EUR][1000 genomes];0.82[ASN][1000 genomes] |
rs12035524 | 0.83[ASN][1000 genomes] |
rs12047756 | 0.81[EUR][1000 genomes] |
rs12740629 | 0.81[EUR][1000 genomes];0.80[ASN][1000 genomes] |
rs12744132 | 0.83[ASN][1000 genomes] |
rs12758945 | 0.80[ASN][1000 genomes] |
rs2048431 | 0.81[EUR][1000 genomes] |
rs2175391 | 0.81[EUR][1000 genomes] |
rs2666826 | 0.82[ASN][1000 genomes] |
rs2985707 | 0.82[ASN][1000 genomes] |
rs34620961 | 0.81[EUR][1000 genomes];0.80[ASN][1000 genomes] |
rs348186 | 0.80[EUR][1000 genomes] |
rs348196 | 0.83[ASN][1000 genomes] |
rs3738590 | 0.82[EUR][1000 genomes];0.83[ASN][1000 genomes] |
rs4278368 | 0.88[AFR][1000 genomes];0.96[AMR][1000 genomes];0.93[EUR][1000 genomes];0.92[ASN][1000 genomes] |
rs475550 | 0.82[EUR][1000 genomes];0.81[ASN][1000 genomes] |
rs490608 | 0.98[ASN][1000 genomes] |
rs6427286 | 0.90[ASN][1000 genomes] |
rs6427287 | 0.91[ASN][1000 genomes] |
rs6662953 | 0.80[AFR][1000 genomes];0.87[AMR][1000 genomes];0.87[EUR][1000 genomes] |
rs6665227 | 0.93[ASN][1000 genomes] |
rs6672128 | 0.82[EUR][1000 genomes];0.81[ASN][1000 genomes] |
rs678157 | 0.81[ASN][1000 genomes] |
rs708611 | 0.85[ASN][1000 genomes] |
rs7521594 | 0.82[EUR][1000 genomes];0.83[ASN][1000 genomes] |
rs7541060 | 0.91[ASN][1000 genomes] |
rs7550402 | 0.91[ASN][1000 genomes] |
rs821551 | 0.83[ASN][1000 genomes] |
rs9426933 | 0.97[ASN][1000 genomes] |
Symbol | Regulation type |
---|---|
ENSG00000227673 | Proximal transcriptional regulation |
MSTO2P | RNA binding protein mediated regulation |
MSTO1 | RNA binding protein mediated regulation |
DAP3 | RNA binding protein mediated regulation |
Copyright: Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences Feedback
Last update: March 26, 2014