SNP Report

Basic Infomation

Name	rs34620961 dbSNP
Location	chr:1,155649827
Allele	G/C

LD-proxy of rSNPs(r²>0.8) (count: 38)

The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r² >=0.8.

rs_ID	r²[population][source]
rs10752611	0.81[AMR][1000 genomes];0.84[EUR][1000 genomes]
rs10908470	0.81[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs10908471	0.83[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs10908479	0.81[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11264380	0.84[EUR][1000 genomes]
rs11264381	0.80[AMR][1000 genomes];0.81[EUR][1000 genomes]
rs11264386	0.80[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs11264387	0.81[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs11264393	0.92[EUR][1000 genomes]
rs12030596	0.85[EUR][1000 genomes]
rs12035524	0.82[AFR][1000 genomes];0.94[AMR][1000 genomes];0.83[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs12047756	0.92[AFR][1000 genomes];0.96[AMR][1000 genomes];0.97[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs12093350	0.85[EUR][1000 genomes]
rs12740629	0.83[AFR][1000 genomes];0.96[AMR][1000 genomes];0.98[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs12744132	0.88[AMR][1000 genomes];0.83[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs12746592	0.81[EUR][1000 genomes]
rs12758945	0.98[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1556488	0.86[EUR][1000 genomes]
rs2048431	0.88[AFR][1000 genomes];0.95[AMR][1000 genomes];0.97[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs2175391	0.97[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs2666826	0.98[ASN][1000 genomes]
rs28662267	0.81[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs34124416	0.94[EUR][1000 genomes]
rs348186	0.81[AMR][1000 genomes];0.97[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs348196	0.82[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs3738590	0.91[AFR][1000 genomes];0.98[AMR][1000 genomes];0.99[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs3851912	0.94[EUR][1000 genomes]
rs3892792	0.88[EUR][1000 genomes]
rs475550	0.81[AMR][1000 genomes];0.99[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs490608	0.82[ASN][1000 genomes]
rs6427278	0.88[EUR][1000 genomes]
rs6672128	0.81[AMR][1000 genomes];0.99[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs670876	0.80[ASN][1000 genomes]
rs678157	0.85[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs71628674	0.80[AMR][1000 genomes];0.94[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs7411786	0.84[EUR][1000 genomes]
rs7521594	0.81[AMR][1000 genomes];0.99[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs9426933	0.81[ASN][1000 genomes]

rSNP related genes

Symbol	Regulation type
YY1AP1	Proximal transcriptional regulation
DAP3	Distal transcriptional regulation
YY1AP1	Distal transcriptional regulation

rSNP related regulatory elements

Proximal transcriptional regulation

Distal transcriptional regulation

Post-transcriptional regulation:within mature miRNA

Post-transcriptional regulation: associated with RNA binding protein

eQTL evidence (count: 0)