SNP Report

Basic Infomation

Name	rs12093350 dbSNP
Location	chr:1,155571609
Allele	A/G

LD-proxy of rSNPs(r²>0.8) (count: 30)

The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r² >=0.8.

rs_ID	r²[population][source]
rs10752611	0.84[AMR][1000 genomes];0.80[EUR][1000 genomes]
rs10908470	0.84[AMR][1000 genomes];0.84[EUR][1000 genomes]
rs10908471	0.87[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs10908479	0.86[EUR][1000 genomes]
rs11264380	0.81[AMR][1000 genomes];0.80[EUR][1000 genomes]
rs11264381	0.83[AMR][1000 genomes];0.80[EUR][1000 genomes]
rs11264386	0.85[AFR][1000 genomes];0.90[AMR][1000 genomes];0.89[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs11264387	0.85[AFR][1000 genomes];0.91[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs11264393	0.94[AMR][1000 genomes];0.92[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12030596	0.81[AMR][1000 genomes];0.84[EUR][1000 genomes]
rs12047756	0.81[AMR][1000 genomes];0.88[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs12048286	0.81[EUR][1000 genomes]
rs12740629	0.84[EUR][1000 genomes]
rs12746592	0.82[AMR][1000 genomes]
rs12758945	0.83[EUR][1000 genomes]
rs1556488	0.82[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs2048431	0.82[AMR][1000 genomes];0.88[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs2175391	0.88[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs34124416	0.94[AMR][1000 genomes];0.91[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs34620961	0.85[EUR][1000 genomes]
rs348186	0.84[EUR][1000 genomes]
rs3738590	0.80[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs3851912	0.92[AMR][1000 genomes];0.91[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs3892792	0.85[AFR][1000 genomes];0.88[EUR][1000 genomes]
rs475550	0.86[EUR][1000 genomes]
rs6427278	0.88[EUR][1000 genomes]
rs6672128	0.86[EUR][1000 genomes]
rs71628674	0.98[AFR][1000 genomes];0.98[AMR][1000 genomes];0.91[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs7411786	0.80[EUR][1000 genomes]
rs7521594	0.86[EUR][1000 genomes]

rSNP related genes

Symbol	Regulation type
MSTO1	Distal transcriptional regulation
ENSG00000232519	Distal transcriptional regulation

rSNP related regulatory elements

Proximal transcriptional regulation

Distal transcriptional regulation

Post-transcriptional regulation:within mature miRNA

Post-transcriptional regulation: associated with RNA binding protein

eQTL evidence (count: 0)