SNP Report

Basic Infomation

Name	rs3851912 dbSNP
Location	chr:1,155586444
Allele	T/G

LD-proxy of rSNPs(r²>0.8) (count: 37)

The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r² >=0.8.

rs_ID	r²[population][source]
rs10752611	0.81[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs10908467	0.83[AMR][1000 genomes]
rs10908470	0.81[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs10908471	0.84[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs10908479	0.94[EUR][1000 genomes]
rs11264380	0.87[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs11264381	0.80[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs11264386	0.83[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs11264387	0.84[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs11264393	0.96[AFR][1000 genomes];0.98[AMR][1000 genomes];0.99[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs12030596	0.90[AFR][1000 genomes];0.87[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs12035524	0.81[EUR][1000 genomes]
rs12041534	0.80[AMR][1000 genomes]
rs12047756	0.97[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs12048286	0.82[AMR][1000 genomes]
rs12067371	0.81[AMR][1000 genomes]
rs12079134	0.80[AMR][1000 genomes]
rs12093350	0.92[AMR][1000 genomes];0.91[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs12740629	0.93[EUR][1000 genomes]
rs12744132	0.81[EUR][1000 genomes]
rs12746592	0.85[EUR][1000 genomes]
rs12758945	0.92[EUR][1000 genomes]
rs1556488	0.88[AFR][1000 genomes];0.88[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs2048431	0.97[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs2175391	0.97[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs34124416	0.96[AFR][1000 genomes];0.98[AMR][1000 genomes];1.00[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs34620961	0.94[EUR][1000 genomes]
rs348186	0.92[EUR][1000 genomes]
rs3738590	0.94[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs3892792	0.94[EUR][1000 genomes]
rs475550	0.94[EUR][1000 genomes]
rs6427278	0.94[EUR][1000 genomes]
rs6672128	0.94[EUR][1000 genomes]
rs678157	0.83[EUR][1000 genomes]
rs71628674	0.94[AMR][1000 genomes];1.00[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs7411786	0.81[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs7521594	0.94[EUR][1000 genomes];0.81[ASN][1000 genomes]

rSNP related genes

Symbol	Regulation type
MSTO1	Distal transcriptional regulation

rSNP related regulatory elements

Proximal transcriptional regulation

Distal transcriptional regulation

Post-transcriptional regulation:within mature miRNA

Post-transcriptional regulation: associated with RNA binding protein

eQTL evidence (count: 0)