SNP Report

Basic Infomation

LD-proxy of rSNPs(r²>0.8) (count: 26)

The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r² >=0.8.

rs_ID	r²[population][source]
rs10908480	0.99[AMR][1000 genomes];0.94[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs10908481	0.95[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs10908482	0.99[ASN][1000 genomes]
rs11264410	0.88[AFR][1000 genomes];0.95[AMR][1000 genomes];0.96[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs12024187	0.85[EUR][1000 genomes]
rs12035524	0.81[ASN][1000 genomes]
rs12744132	0.81[ASN][1000 genomes]
rs28662267	0.88[AFR][1000 genomes];0.96[AMR][1000 genomes];0.93[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs2948071	0.86[ASN][1000 genomes]
rs2948072	0.87[ASN][1000 genomes]
rs2985707	0.90[ASN][1000 genomes]
rs348196	0.81[ASN][1000 genomes]
rs3738590	0.83[ASN][1000 genomes]
rs490608	0.94[ASN][1000 genomes]
rs6427286	0.97[ASN][1000 genomes]
rs6427287	0.98[ASN][1000 genomes]
rs6662953	0.86[AFR][1000 genomes];0.91[AMR][1000 genomes];0.94[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs6665227	0.99[ASN][1000 genomes]
rs708611	0.93[ASN][1000 genomes]
rs7521594	0.83[ASN][1000 genomes]
rs7541060	0.98[ASN][1000 genomes]
rs7550402	0.98[ASN][1000 genomes]
rs821551	0.81[ASN][1000 genomes]
rs822025	0.87[ASN][1000 genomes]
rs860295	0.83[ASN][1000 genomes]
rs9426933	0.95[ASN][1000 genomes]

rSNP related genes

Symbol	Regulation type
GON4L	Proximal transcriptional regulation

rSNP related regulatory elements

eQTL evidence (count: 0)