SNP Report
Name | rs28370682   dbSNP |
---|---|
Location | chr:12,40423996 |
Allele | T/A |
The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r2 >=0.8.
rs_ID | r2[population][source] |
---|---|
rs10506143 | 1.00[AFR][1000 genomes];0.89[AMR][1000 genomes];0.93[ASN][1000 genomes] |
rs10506144 | 1.00[CEU][hapmap];1.00[AFR][1000 genomes];0.94[AMR][1000 genomes];0.93[EUR][1000 genomes];0.93[ASN][1000 genomes] |
rs11174631 | 1.00[CHB][hapmap];0.91[AMR][1000 genomes] |
rs11174697 | 1.00[CEU][hapmap];1.00[AFR][1000 genomes];0.94[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs11174728 | 1.00[CHB][hapmap] |
rs11174995 | 1.00[CHB][hapmap] |
rs11175069 | 1.00[CHB][hapmap] |
rs11175186 | 1.00[AFR][1000 genomes];0.94[AMR][1000 genomes];0.93[EUR][1000 genomes];0.93[ASN][1000 genomes] |
rs11564108 | 1.00[AFR][1000 genomes];0.93[ASN][1000 genomes] |
rs11564199 | 1.00[CEU][hapmap];1.00[AFR][1000 genomes];0.96[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs11564216 | 1.00[CEU][hapmap];1.00[AFR][1000 genomes];0.94[AMR][1000 genomes];0.93[EUR][1000 genomes];0.93[ASN][1000 genomes] |
rs11564218 | 1.00[AFR][1000 genomes];0.89[AMR][1000 genomes] |
rs12368785 | 1.00[JPT][hapmap] |
rs12368891 | 1.00[JPT][hapmap] |
rs12422544 | 1.00[CEU][hapmap];1.00[AFR][1000 genomes];0.91[AMR][1000 genomes];0.93[EUR][1000 genomes] |
rs12424040 | 1.00[AFR][1000 genomes];0.94[AMR][1000 genomes];0.93[EUR][1000 genomes];0.93[ASN][1000 genomes] |
rs12424294 | 1.00[AFR][1000 genomes];0.89[AMR][1000 genomes];0.93[ASN][1000 genomes] |
rs12425630 | 1.00[AFR][1000 genomes];0.91[AMR][1000 genomes] |
rs12426378 | 1.00[CEU][hapmap];1.00[AFR][1000 genomes];0.94[AMR][1000 genomes];0.93[EUR][1000 genomes];0.93[ASN][1000 genomes] |
rs12427022 | 1.00[AFR][1000 genomes];0.89[AMR][1000 genomes];0.93[ASN][1000 genomes] |
rs1388585 | 1.00[CEU][hapmap];0.83[AMR][1000 genomes];0.81[EUR][1000 genomes] |
rs1388597 | 1.00[CEU][hapmap];0.81[AMR][1000 genomes];0.87[EUR][1000 genomes] |
rs17442206 | 1.00[JPT][hapmap] |
rs17442297 | 1.00[JPT][hapmap] |
rs17442742 | 1.00[JPT][hapmap] |
rs17442924 | 1.00[CEU][hapmap];0.86[EUR][1000 genomes] |
rs17442980 | 1.00[JPT][hapmap] |
rs17443178 | 1.00[JPT][hapmap];0.80[EUR][1000 genomes] |
rs17443185 | 1.00[CEU][hapmap];1.00[JPT][hapmap];0.86[EUR][1000 genomes] |
rs17443206 | 1.00[CEU][hapmap];1.00[JPT][hapmap];0.86[EUR][1000 genomes] |
rs17443366 | 1.00[JPT][hapmap] |
rs17443380 | 1.00[JPT][hapmap] |
rs17443387 | 1.00[JPT][hapmap] |
rs17458093 | 1.00[JPT][hapmap] |
rs17458121 | 1.00[JPT][hapmap] |
rs17458202 | 1.00[JPT][hapmap] |
rs17458230 | 1.00[JPT][hapmap] |
rs17458396 | 1.00[JPT][hapmap] |
rs17458417 | 1.00[JPT][hapmap] |
rs17458487 | 1.00[JPT][hapmap] |
rs17458528 | 1.00[JPT][hapmap] |
rs17458836 | 1.00[JPT][hapmap] |
rs17461337 | 1.00[JPT][hapmap] |
rs17465737 | 1.00[JPT][hapmap] |
rs17465751 | 1.00[JPT][hapmap] |
rs17483857 | 1.00[JPT][hapmap] |
rs17483919 | 0.81[AMR][1000 genomes] |
rs17483996 | 1.00[JPT][hapmap] |
rs17484003 | 0.93[EUR][1000 genomes] |
rs17489170 | 1.00[JPT][hapmap] |
rs17489218 | 1.00[JPT][hapmap] |
rs17489225 | 1.00[JPT][hapmap] |
rs17489246 | 1.00[JPT][hapmap] |
rs17489253 | 1.00[JPT][hapmap] |
rs17489267 | 1.00[JPT][hapmap] |
rs17489365 | 1.00[JPT][hapmap] |
rs17489410 | 1.00[JPT][hapmap] |
rs17489417 | 1.00[JPT][hapmap] |
rs17489466 | 1.00[JPT][hapmap] |
rs17489501 | 1.00[JPT][hapmap] |
rs17489583 | 1.00[JPT][hapmap] |
rs17489590 | 1.00[JPT][hapmap] |
rs17489597 | 1.00[JPT][hapmap] |
rs17489638 | 1.00[JPT][hapmap] |
rs17489869 | 1.00[JPT][hapmap] |
rs17490006 | 1.00[JPT][hapmap] |
rs17490334 | 1.00[JPT][hapmap] |
rs17490341 | 1.00[JPT][hapmap] |
rs17490599 | 1.00[JPT][hapmap] |
rs17518057 | 1.00[JPT][hapmap] |
rs17518071 | 1.00[JPT][hapmap] |
rs17518141 | 1.00[JPT][hapmap] |
rs17518148 | 1.00[JPT][hapmap] |
rs17518155 | 1.00[JPT][hapmap] |
rs17518204 | 1.00[JPT][hapmap] |
rs17518232 | 1.00[JPT][hapmap] |
rs17518343 | 1.00[JPT][hapmap] |
rs17518413 | 1.00[JPT][hapmap] |
rs17518420 | 1.00[JPT][hapmap] |
rs17518532 | 1.00[JPT][hapmap] |
rs17518910 | 1.00[JPT][hapmap] |
rs2708460 | 0.86[EUR][1000 genomes] |
rs28365169 | 1.00[CEU][hapmap];1.00[AFR][1000 genomes];0.94[AMR][1000 genomes];0.93[EUR][1000 genomes];0.93[ASN][1000 genomes] |
rs28365173 | 1.00[CEU][hapmap];1.00[JPT][hapmap];1.00[AFR][1000 genomes];0.94[AMR][1000 genomes];0.93[EUR][1000 genomes];0.93[ASN][1000 genomes] |
rs28365178 | 1.00[JPT][hapmap] |
rs28365191 | 1.00[JPT][hapmap] |
rs28365203 | 1.00[JPT][hapmap] |
rs28365206 | 1.00[JPT][hapmap] |
rs28365211 | 1.00[JPT][hapmap] |
rs28365669 | 0.84[AMR][1000 genomes] |
rs28365682 | 1.00[JPT][hapmap] |
rs28365689 | 1.00[AFR][1000 genomes];0.94[AMR][1000 genomes];0.93[EUR][1000 genomes];0.93[ASN][1000 genomes] |
rs28365690 | 1.00[JPT][hapmap] |
rs28370601 | 1.00[JPT][hapmap] |
rs28370605 | 1.00[JPT][hapmap] |
rs28370608 | 1.00[JPT][hapmap] |
rs28370616 | 1.00[JPT][hapmap] |
rs28370637 | 0.89[AMR][1000 genomes] |
rs28370643 | 1.00[JPT][hapmap] |
rs28370649 | 1.00[CEU][hapmap];1.00[JPT][hapmap];0.93[EUR][1000 genomes] |
rs28370650 | 1.00[CEU][hapmap];0.93[EUR][1000 genomes] |
rs28370652 | 1.00[JPT][hapmap] |
rs28370655 | 1.00[JPT][hapmap] |
rs28370658 | 1.00[JPT][hapmap] |
rs28370664 | 1.00[CEU][hapmap];1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.94[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs28370665 | 1.00[JPT][hapmap] |
rs28370670 | 1.00[JPT][hapmap] |
rs28370672 | 1.00[JPT][hapmap] |
rs28370673 | 1.00[JPT][hapmap] |
rs28370686 | 1.00[JPT][hapmap] |
rs28370690 | 1.00[JPT][hapmap] |
rs28370692 | 1.00[JPT][hapmap] |
rs28370696 | 1.00[JPT][hapmap] |
rs28370700 | 1.00[JPT][hapmap] |
rs28370707 | 1.00[JPT][hapmap] |
rs28370718 | 1.00[JPT][hapmap] |
rs28370731 | 1.00[JPT][hapmap] |
rs28370737 | 1.00[JPT][hapmap] |
rs28370744 | 1.00[JPT][hapmap] |
rs28370750 | 1.00[JPT][hapmap] |
rs28370751 | 1.00[JPT][hapmap] |
rs28370755 | 1.00[JPT][hapmap] |
rs28370764 | 1.00[JPT][hapmap] |
rs28370765 | 1.00[JPT][hapmap] |
rs28370767 | 1.00[JPT][hapmap] |
rs28370768 | 1.00[JPT][hapmap] |
rs28370771 | 1.00[JPT][hapmap] |
rs28370772 | 1.00[JPT][hapmap] |
rs28370776 | 1.00[JPT][hapmap] |
rs28370779 | 1.00[JPT][hapmap] |
rs28370787 | 1.00[JPT][hapmap] |
rs28370793 | 1.00[JPT][hapmap] |
rs28370796 | 1.00[JPT][hapmap] |
rs28370800 | 1.00[JPT][hapmap] |
rs28370806 | 1.00[JPT][hapmap] |
rs28370808 | 1.00[JPT][hapmap] |
rs28370813 | 1.00[JPT][hapmap] |
rs28370818 | 1.00[JPT][hapmap] |
rs28370823 | 1.00[JPT][hapmap] |
rs28370826 | 1.00[JPT][hapmap] |
rs28370830 | 1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs4405389 | 1.00[JPT][hapmap] |
rs4768206 | 1.00[CHB][hapmap];0.91[AMR][1000 genomes] |
rs4768213 | 1.00[CEU][hapmap];1.00[AFR][1000 genomes];0.94[AMR][1000 genomes];0.93[EUR][1000 genomes];0.93[ASN][1000 genomes] |
rs8181671 | 1.00[CHB][hapmap] |
Symbol | Regulation type |
---|---|
SLC2A13 | RNA binding protein mediated regulation |
Copyright: Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences Feedback
Last update: March 26, 2014