SNP Report
Name | rs12425630   dbSNP |
---|---|
Location | chr:12,40408991 |
Allele | G/T |
The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r2 >=0.8.
rs_ID | r2[population][source] |
---|---|
rs10506143 | 1.00[AFR][1000 genomes];0.94[AMR][1000 genomes];1.00[EUR][1000 genomes] |
rs10506144 | 1.00[AFR][1000 genomes];0.89[AMR][1000 genomes] |
rs11174631 | 0.86[AMR][1000 genomes] |
rs11174697 | 1.00[AFR][1000 genomes];0.89[AMR][1000 genomes] |
rs11175186 | 1.00[AFR][1000 genomes];0.89[AMR][1000 genomes] |
rs11564108 | 1.00[AFR][1000 genomes];0.83[AMR][1000 genomes];1.00[EUR][1000 genomes] |
rs11564131 | 1.00[EUR][1000 genomes] |
rs11564199 | 1.00[AFR][1000 genomes];0.87[AMR][1000 genomes] |
rs11564216 | 1.00[AFR][1000 genomes];0.89[AMR][1000 genomes] |
rs11564218 | 1.00[AFR][1000 genomes];0.94[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs12422544 | 1.00[AFR][1000 genomes];0.85[AMR][1000 genomes] |
rs12424040 | 1.00[AFR][1000 genomes];0.89[AMR][1000 genomes] |
rs12424294 | 1.00[AFR][1000 genomes];0.94[AMR][1000 genomes];1.00[EUR][1000 genomes] |
rs12425561 | 1.00[EUR][1000 genomes] |
rs12426378 | 1.00[AFR][1000 genomes];0.89[AMR][1000 genomes] |
rs12427022 | 1.00[AFR][1000 genomes];0.94[AMR][1000 genomes];1.00[EUR][1000 genomes] |
rs17483919 | 0.83[AMR][1000 genomes];1.00[EUR][1000 genomes] |
rs2131081 | 1.00[EUR][1000 genomes] |
rs28365169 | 1.00[AFR][1000 genomes];0.89[AMR][1000 genomes] |
rs28365173 | 1.00[AFR][1000 genomes];0.89[AMR][1000 genomes] |
rs28365206 | 1.00[EUR][1000 genomes] |
rs28365689 | 1.00[AFR][1000 genomes];0.89[AMR][1000 genomes] |
rs28370637 | 0.84[AMR][1000 genomes] |
rs28370664 | 1.00[AFR][1000 genomes];0.91[AMR][1000 genomes] |
rs28370682 | 1.00[AFR][1000 genomes];0.91[AMR][1000 genomes] |
rs28370830 | 1.00[AFR][1000 genomes];0.91[AMR][1000 genomes] |
rs4768206 | 0.86[AMR][1000 genomes] |
rs4768213 | 1.00[AFR][1000 genomes];0.89[AMR][1000 genomes] |
Symbol | Regulation type |
---|---|
LRRK2 | Distal transcriptional regulation |
MUC19 | Distal transcriptional regulation |
SLC2A13 | Distal transcriptional regulation |
SLC2A13 | RNA binding protein mediated regulation |
Copyright: Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences Feedback
Last update: March 26, 2014