SNP Report
Name | rs28365206   dbSNP |
---|---|
Location | chr:12,40610389 |
Allele | T/A |
The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r2 >=0.8.
rs_ID | r2[population][source] |
---|---|
rs10506143 | 0.82[AMR][1000 genomes];1.00[EUR][1000 genomes] |
rs10506144 | 1.00[CHB][hapmap] |
rs10506146 | 1.00[CHB][hapmap];1.00[AFR][1000 genomes];0.90[AMR][1000 genomes];0.93[ASN][1000 genomes] |
rs10878244 | 1.00[JPT][hapmap] |
rs11175186 | 1.00[CHB][hapmap] |
rs11564108 | 1.00[CHB][hapmap];0.82[AMR][1000 genomes];1.00[EUR][1000 genomes] |
rs11564131 | 1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs11564153 | 0.82[AMR][1000 genomes] |
rs11564185 | 1.00[JPT][hapmap] |
rs11564187 | 1.00[JPT][hapmap];0.82[AMR][1000 genomes] |
rs11564209 | 1.00[JPT][hapmap] |
rs11564210 | 1.00[JPT][hapmap];0.82[AMR][1000 genomes] |
rs11564216 | 1.00[CHB][hapmap];1.00[JPT][hapmap] |
rs11564218 | 0.82[AMR][1000 genomes];1.00[EUR][1000 genomes] |
rs12422544 | 1.00[CHB][hapmap];0.81[AMR][1000 genomes];0.80[ASN][1000 genomes] |
rs12423419 | 0.85[AMR][1000 genomes];1.00[EUR][1000 genomes] |
rs12423551 | 0.84[AMR][1000 genomes];1.00[EUR][1000 genomes] |
rs12424294 | 1.00[CHB][hapmap];0.82[AMR][1000 genomes];1.00[EUR][1000 genomes] |
rs12425561 | 1.00[CHB][hapmap];1.00[AFR][1000 genomes];0.90[AMR][1000 genomes];1.00[EUR][1000 genomes];0.80[ASN][1000 genomes] |
rs12425630 | 1.00[EUR][1000 genomes] |
rs12427022 | 1.00[CHB][hapmap];0.82[AMR][1000 genomes];1.00[EUR][1000 genomes] |
rs1388585 | 1.00[CHB][hapmap];0.80[ASN][1000 genomes] |
rs1388597 | 1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[AFR][1000 genomes];0.94[AMR][1000 genomes] |
rs1491945 | 1.00[AMR][1000 genomes];0.88[ASN][1000 genomes] |
rs17443656 | 1.00[JPT][hapmap] |
rs17458121 | 1.00[JPT][hapmap] |
rs17458230 | 1.00[JPT][hapmap] |
rs17461692 | 0.84[AMR][1000 genomes];1.00[EUR][1000 genomes] |
rs17466016 | 1.00[JPT][hapmap] |
rs17483919 | 1.00[CHB][hapmap];1.00[AFR][1000 genomes];0.90[AMR][1000 genomes];1.00[EUR][1000 genomes];0.80[ASN][1000 genomes] |
rs17484003 | 1.00[AFR][1000 genomes];0.84[AMR][1000 genomes];0.93[ASN][1000 genomes] |
rs17484141 | 0.90[AMR][1000 genomes];1.00[EUR][1000 genomes] |
rs17519825 | 1.00[JPT][hapmap] |
rs2131081 | 1.00[CHB][hapmap];1.00[AFR][1000 genomes];0.90[AMR][1000 genomes];1.00[EUR][1000 genomes];0.93[ASN][1000 genomes] |
rs28365169 | 1.00[CHB][hapmap] |
rs28365173 | 1.00[CHB][hapmap];1.00[JPT][hapmap] |
rs28370673 | 1.00[CEU][hapmap] |
rs28370682 | 1.00[JPT][hapmap] |
rs34567498 | 0.85[AMR][1000 genomes];1.00[EUR][1000 genomes] |
rs4768213 | 1.00[CHB][hapmap] |
rs4768226 | 1.00[JPT][hapmap] |
Symbol | Regulation type |
---|---|
MUC19 | Distal transcriptional regulation |
Copyright: Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences Feedback
Last update: March 26, 2014