SNP Report

Basic Infomation

Name	rs12418535 dbSNP
Location	chr:11,63910980
Allele	A/G

LD-proxy of rSNPs(r²>0.8) (count: 33)

The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r² >=0.8.

rs_ID	r²[population][source]
rs11601522	0.85[ASN][1000 genomes]
rs11603042	0.83[CHB][hapmap]
rs11603192	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.93[YRI][hapmap];0.89[AFR][1000 genomes];0.94[AMR][1000 genomes];0.93[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs11603384	0.92[CEU][hapmap];0.94[CHB][hapmap];1.00[JPT][hapmap];0.81[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs11603538	0.92[CEU][hapmap];0.95[CHB][hapmap];1.00[JPT][hapmap];0.89[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs11604782	0.92[CEU][hapmap];0.84[CHB][hapmap];0.94[JPT][hapmap];0.81[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs12420070	0.87[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs12787945	0.80[CHB][hapmap]
rs1860368	0.84[CEU][hapmap];0.83[CHB][hapmap];0.94[JPT][hapmap]
rs2236648	0.80[CHB][hapmap]
rs2282491	0.84[CEU][hapmap];0.94[YRI][hapmap];0.90[AFR][1000 genomes];0.95[AMR][1000 genomes];0.90[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs2282492	0.96[CEU][hapmap];1.00[CHB][hapmap];0.94[JPT][hapmap];1.00[YRI][hapmap];0.88[AFR][1000 genomes];0.95[AMR][1000 genomes];0.90[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs2429455	0.84[CEU][hapmap];0.87[JPT][hapmap]
rs2515241	0.92[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.89[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs2845597	0.92[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.88[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs3888316	0.87[AMR][1000 genomes];0.87[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs4980508	0.80[CHB][hapmap]
rs4980524	0.81[CHB][hapmap]
rs594461	0.80[CEU][hapmap]
rs594942	0.94[CHB][hapmap];0.88[JPT][hapmap]
rs604203	0.80[JPT][hapmap]
rs60452247	0.83[AMR][1000 genomes];0.89[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs614397	0.88[YRI][hapmap]
rs638227	0.81[CEU][hapmap]
rs640999	0.81[CEU][hapmap]
rs641430	0.80[CEU][hapmap]
rs651855	0.80[CEU][hapmap]
rs6591836	0.91[AMR][1000 genomes];0.92[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs7102177	0.97[AFR][1000 genomes];0.98[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7111753	0.87[AMR][1000 genomes];0.87[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs7112960	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.92[AFR][1000 genomes];0.97[AMR][1000 genomes];0.98[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs7938819	0.81[CHB][hapmap];0.80[ASN][1000 genomes]
rs882147	0.81[CHB][hapmap]

rSNP related genes

Symbol	Regulation type
MACROD1	Distal transcriptional regulation
MACROD1	RNA binding protein mediated regulation

rSNP related regulatory elements

Proximal transcriptional regulation

Distal transcriptional regulation

Post-transcriptional regulation:within mature miRNA

Post-transcriptional regulation: associated with RNA binding protein

eQTL evidence (count: 0)