SNP Report

Basic Infomation

Name	rs11604782 dbSNP
Location	chr:11,63946650
Allele	G/A

LD-proxy of rSNPs(r²>0.8) (count: 28)

The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r² >=0.8.

rs_ID	r²[population][source]
rs11601522	0.87[AFR][1000 genomes];0.95[AMR][1000 genomes];0.97[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs11603042	0.93[YRI][hapmap];0.81[EUR][1000 genomes]
rs11603192	0.92[CEU][hapmap];0.83[CHB][hapmap];0.93[JPT][hapmap];0.86[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs11603384	1.00[CEU][hapmap];0.89[CHB][hapmap];0.93[JPT][hapmap];1.00[YRI][hapmap];0.89[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11603538	0.92[CEU][hapmap];0.94[JPT][hapmap];0.92[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs12418535	0.92[CEU][hapmap];0.84[CHB][hapmap];0.94[JPT][hapmap];0.81[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs12420070	0.90[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs1860368	0.92[CEU][hapmap];0.87[JPT][hapmap];0.92[EUR][1000 genomes]
rs2282491	0.81[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs2282492	0.88[CEU][hapmap];0.83[CHB][hapmap];0.87[JPT][hapmap];0.81[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs2429455	0.92[CEU][hapmap];0.80[JPT][hapmap];0.91[EUR][1000 genomes]
rs2515241	0.92[CEU][hapmap];0.84[CHB][hapmap];0.94[JPT][hapmap];0.92[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs2845597	0.92[CEU][hapmap];0.83[CHB][hapmap];0.93[JPT][hapmap];0.80[AMR][1000 genomes];0.91[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs3741404	0.88[YRI][hapmap];0.83[EUR][1000 genomes]
rs3888316	0.88[AMR][1000 genomes];0.90[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs594461	0.80[CEU][hapmap]
rs594942	0.88[CEU][hapmap];0.89[CHB][hapmap];0.82[JPT][hapmap];0.83[EUR][1000 genomes]
rs595880	0.83[EUR][1000 genomes]
rs604203	0.86[YRI][hapmap]
rs60452247	0.82[AMR][1000 genomes];0.92[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs638227	0.81[CEU][hapmap]
rs640999	0.81[CEU][hapmap]
rs641430	0.80[CEU][hapmap]
rs651855	0.80[CEU][hapmap]
rs6591836	0.88[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs7102177	0.83[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs7111753	0.88[AMR][1000 genomes];0.91[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs7112960	0.92[CEU][hapmap];0.83[CHB][hapmap];0.93[JPT][hapmap];0.83[EUR][1000 genomes];0.87[ASN][1000 genomes]

rSNP related genes

Symbol	Regulation type
MACROD1	Distal transcriptional regulation
FKBP2	Distal transcriptional regulation

rSNP related regulatory elements

Proximal transcriptional regulation

Distal transcriptional regulation

Post-transcriptional regulation:within mature miRNA

Post-transcriptional regulation: associated with RNA binding protein

eQTL evidence (count: 0)