SNP Report

Basic Infomation

Name	rs7938819 dbSNP
Location	chr:11,63910116
Allele	G/A

LD-proxy of rSNPs(r²>0.8) (count: 24)

The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r² >=0.8.

rs_ID	r²[population][source]
rs11231722	0.83[AMR][1000 genomes];0.92[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs1123251	0.82[CEU][hapmap]
rs11603192	0.80[CHB][hapmap]
rs12362602	0.90[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs12418535	0.81[CHB][hapmap];0.80[ASN][1000 genomes]
rs12787945	0.96[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.81[AMR][1000 genomes];0.91[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs17699798	0.81[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs1860368	0.83[JPT][hapmap]
rs2236647	0.92[CEU][hapmap];0.88[EUR][1000 genomes]
rs2236648	0.96[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.83[AMR][1000 genomes];0.92[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs2282492	0.80[CHB][hapmap];0.83[JPT][hapmap]
rs2515241	0.81[CHB][hapmap]
rs2701533	0.87[AMR][1000 genomes];0.96[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs2845597	0.80[CHB][hapmap]
rs2875748	0.92[CEU][hapmap];0.86[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs3751120	0.92[YRI][hapmap]
rs4980508	1.00[CHB][hapmap];1.00[JPT][hapmap];0.90[ASN][1000 genomes]
rs4980524	0.96[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.84[AMR][1000 genomes];0.92[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs627055	0.85[CEU][hapmap]
rs645461	0.95[AFR][1000 genomes];0.90[AMR][1000 genomes];0.98[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs7102177	0.80[ASN][1000 genomes]
rs7112960	0.80[CHB][hapmap]
rs7948329	0.95[AFR][1000 genomes];0.99[AMR][1000 genomes];0.98[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs882147	0.96[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.81[AMR][1000 genomes];0.92[EUR][1000 genomes];0.87[ASN][1000 genomes]

rSNP related genes

Symbol	Regulation type
MACROD1	Distal transcriptional regulation
MACROD1	RNA binding protein mediated regulation

rSNP related regulatory elements

Proximal transcriptional regulation

Distal transcriptional regulation

Post-transcriptional regulation:within mature miRNA

Post-transcriptional regulation: associated with RNA binding protein

eQTL evidence (count: 0)