SNP Report

Basic Infomation

LD-proxy of rSNPs(r²>0.8) (count: 12)

The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r² >=0.8.

rs_ID	r²[population][source]
rs11231722	0.82[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs12362602	0.89[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs12787945	0.90[EUR][1000 genomes]
rs17699798	0.93[EUR][1000 genomes]
rs2236647	0.87[EUR][1000 genomes]
rs2236648	0.82[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs2701533	0.86[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs2875748	0.85[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs4980524	0.83[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs645461	0.90[AFR][1000 genomes];0.89[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs7938819	0.95[AFR][1000 genomes];0.99[AMR][1000 genomes];0.98[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs882147	0.91[EUR][1000 genomes]

rSNP related genes

Symbol	Regulation type
MACROD1	RNA binding protein mediated regulation

rSNP related regulatory elements

eQTL evidence (count: 0)