SNP Report

Basic Infomation

Name	rs8042497 dbSNP
Location	chr:15,91110331
Allele	T/A

LD-proxy of rSNPs(r²>0.8) (count: 36)

The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r² >=0.8.

rs_ID	r²[population][source]
rs10775250	0.85[ASN][1000 genomes]
rs10852133	0.90[CHB][hapmap];0.83[JPT][hapmap];0.85[ASN][1000 genomes]
rs10852135	0.86[AMR][1000 genomes];0.89[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs10852136	1.00[CEU][hapmap];0.85[CHB][hapmap];0.97[AMR][1000 genomes];0.93[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs11073935	0.85[ASN][1000 genomes]
rs11073937	1.00[AMR][1000 genomes];0.92[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs11635656	0.86[ASN][1000 genomes]
rs12148672	1.00[ASN][1000 genomes]
rs12438183	1.00[CEU][hapmap];0.86[CHB][hapmap];0.97[AMR][1000 genomes];0.93[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs12901150	0.91[CHB][hapmap];0.83[JPT][hapmap];0.91[ASN][1000 genomes]
rs13313427	0.81[CEU][hapmap];0.90[CHB][hapmap];0.83[JPT][hapmap];0.81[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs34641633	0.88[ASN][1000 genomes]
rs4352026	0.91[ASN][1000 genomes]
rs4566137	0.81[CEU][hapmap];0.90[CHB][hapmap];0.83[JPT][hapmap];0.86[AMR][1000 genomes];0.86[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs6416552	1.00[CEU][hapmap];0.86[CHB][hapmap];0.97[AMR][1000 genomes];0.93[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs6416553	1.00[CEU][hapmap];0.81[CHB][hapmap];0.97[AMR][1000 genomes];0.94[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs6416554	1.00[CEU][hapmap];0.86[CHB][hapmap];0.97[AMR][1000 genomes];0.93[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs6496688	0.86[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs6496689	0.91[CHB][hapmap];0.83[ASN][1000 genomes]
rs6496690	0.87[AMR][1000 genomes];0.90[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs6496691	0.84[AMR][1000 genomes];0.86[ASN][1000 genomes]
rs6496692	0.91[ASN][1000 genomes]
rs6496697	1.00[CEU][hapmap];0.85[CHB][hapmap];0.97[AMR][1000 genomes];0.93[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs6496698	0.97[AMR][1000 genomes];0.94[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs6496699	0.81[AMR][1000 genomes]
rs71311223	0.90[ASN][1000 genomes]
rs7166173	0.95[CHB][hapmap];0.92[ASN][1000 genomes]
rs7168764	0.86[AMR][1000 genomes];0.89[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs7171629	0.97[AMR][1000 genomes];0.94[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs7171953	0.92[ASN][1000 genomes]
rs7173175	0.95[CHB][hapmap];0.90[ASN][1000 genomes]
rs7180053	0.91[ASN][1000 genomes]
rs7183319	0.81[CEU][hapmap];0.90[CHB][hapmap];0.83[JPT][hapmap];0.86[AMR][1000 genomes];0.86[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs7494949	0.83[CHB][hapmap];0.86[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs8024734	0.82[CEU][hapmap];0.89[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs8030799	0.84[AMR][1000 genomes];0.89[EUR][1000 genomes]

rSNP related genes

Symbol	Regulation type
CRTC3	RNA binding protein mediated regulation

rSNP related regulatory elements

Proximal transcriptional regulation

Distal transcriptional regulation

Post-transcriptional regulation:within mature miRNA

Post-transcriptional regulation: associated with RNA binding protein

eQTL evidence (count: 0)