SNP Report

Basic Infomation

Name	rs7494949 dbSNP
Location	chr:15,91090394
Allele	C/G

LD-proxy of rSNPs(r²>0.8) (count: 35)

The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r² >=0.8.

rs_ID	r²[population][source]
rs10775250	0.98[ASN][1000 genomes]
rs10852133	0.94[CHB][hapmap];0.84[JPT][hapmap];0.98[ASN][1000 genomes]
rs10852135	0.85[AMR][1000 genomes];0.87[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs10852136	0.81[CHB][hapmap];0.80[EUR][1000 genomes]
rs11073935	0.98[ASN][1000 genomes]
rs11073937	0.89[ASN][1000 genomes]
rs11635656	0.97[ASN][1000 genomes]
rs11636695	0.80[CHB][hapmap]
rs12148672	0.83[ASN][1000 genomes]
rs12438183	0.80[CEU][hapmap];0.81[CHB][hapmap];0.80[EUR][1000 genomes]
rs12901150	0.94[CHB][hapmap];0.90[ASN][1000 genomes]
rs13313427	1.00[CEU][hapmap];0.94[CHB][hapmap];0.84[JPT][hapmap];0.97[AFR][1000 genomes];0.97[AMR][1000 genomes];0.94[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs17180057	0.81[CHB][hapmap]
rs4352026	0.90[ASN][1000 genomes]
rs4566137	1.00[CEU][hapmap];0.94[CHB][hapmap];0.84[JPT][hapmap];0.82[AFR][1000 genomes];0.91[AMR][1000 genomes];0.98[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs6416552	0.80[CEU][hapmap];0.81[CHB][hapmap];0.80[EUR][1000 genomes]
rs6416553	0.81[EUR][1000 genomes]
rs6416554	0.80[CEU][hapmap];0.81[CHB][hapmap];0.80[EUR][1000 genomes]
rs6496688	0.98[AMR][1000 genomes];0.93[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6496689	0.94[CHB][hapmap];0.96[ASN][1000 genomes]
rs6496690	0.90[AMR][1000 genomes];0.96[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs6496697	0.81[CHB][hapmap];0.80[EUR][1000 genomes]
rs6496698	0.81[EUR][1000 genomes]
rs71311223	0.87[ASN][1000 genomes]
rs7165429	0.80[CHB][hapmap]
rs7166173	0.88[CHB][hapmap];0.89[ASN][1000 genomes]
rs7168764	0.88[AMR][1000 genomes];0.95[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs7171629	0.81[EUR][1000 genomes]
rs7171953	0.89[ASN][1000 genomes]
rs7173175	0.88[CHB][hapmap];0.87[ASN][1000 genomes]
rs7180053	0.81[CHB][hapmap];0.90[ASN][1000 genomes]
rs7183319	1.00[CEU][hapmap];0.94[CHB][hapmap];0.84[JPT][hapmap];0.91[AMR][1000 genomes];1.00[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs8024734	0.80[CEU][hapmap];0.83[EUR][1000 genomes]
rs8030799	0.81[EUR][1000 genomes]
rs8042497	0.83[CHB][hapmap];0.86[EUR][1000 genomes];0.83[ASN][1000 genomes]

rSNP related genes

Symbol	Regulation type
CRTC3	Distal transcriptional regulation
CRTC3	RNA binding protein mediated regulation

rSNP related regulatory elements

Proximal transcriptional regulation

Distal transcriptional regulation

Post-transcriptional regulation:within mature miRNA

Post-transcriptional regulation: associated with RNA binding protein

eQTL evidence (count: 0)