SNP Report
Name | rs6496699   dbSNP |
---|---|
Location | chr:15,91138666 |
Allele | C/T |
The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r2 >=0.8.
rs_ID | r2[population][source] |
---|---|
rs10520693 | 0.82[AMR][1000 genomes];0.82[EUR][1000 genomes];0.81[ASN][1000 genomes] |
rs10852136 | 0.81[AMR][1000 genomes] |
rs11073937 | 0.81[AMR][1000 genomes] |
rs11633340 | 0.83[AMR][1000 genomes];0.83[ASN][1000 genomes] |
rs11638226 | 0.80[AMR][1000 genomes];0.83[ASN][1000 genomes] |
rs12438183 | 0.81[AMR][1000 genomes] |
rs3743402 | 0.82[AMR][1000 genomes] |
rs3803565 | 0.82[AMR][1000 genomes] |
rs4932349 | 0.85[ASN][1000 genomes] |
rs6416552 | 0.81[AMR][1000 genomes] |
rs6416553 | 0.81[AMR][1000 genomes] |
rs6416554 | 0.81[AMR][1000 genomes] |
rs6416555 | 0.85[AMR][1000 genomes];0.84[ASN][1000 genomes] |
rs6496693 | 0.86[ASN][1000 genomes] |
rs6496695 | 1.00[ASN][1000 genomes] |
rs6496697 | 0.81[AMR][1000 genomes] |
rs6496698 | 0.81[AMR][1000 genomes] |
rs6496700 | 0.94[AMR][1000 genomes];0.98[EUR][1000 genomes];0.88[ASN][1000 genomes] |
rs6496716 | 0.82[AMR][1000 genomes] |
rs7171629 | 0.81[AMR][1000 genomes] |
rs7175350 | 0.94[AMR][1000 genomes];0.98[EUR][1000 genomes];0.92[ASN][1000 genomes] |
rs7175391 | 0.93[AMR][1000 genomes];0.98[EUR][1000 genomes];0.92[ASN][1000 genomes] |
rs7178220 | 0.96[ASN][1000 genomes] |
rs7178587 | 0.82[AMR][1000 genomes] |
rs7180867 | 0.91[AMR][1000 genomes];0.98[EUR][1000 genomes];0.88[ASN][1000 genomes] |
rs7183485 | 0.83[AMR][1000 genomes];0.83[ASN][1000 genomes] |
rs8042497 | 0.81[AMR][1000 genomes] |
Symbol | Regulation type |
---|---|
CRTC3 | Proximal transcriptional regulation |
CRTC3 | Distal transcriptional regulation |
CRTC3 | RNA binding protein mediated regulation |
Copyright: Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences Feedback
Last update: March 26, 2014