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rVarBase
SNP Report
Basic Infomation
Name
rs6496691  
dbSNP
Location
chr:15,91109611
Allele
G/A
LD-proxy of rSNPs(r
2
>0.8) (count: 14)
The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r
2
>=0.8.
rs_ID
r
2
[population][source]
rs10852136
0.81[AMR][1000 genomes]
rs11073937
0.84[AMR][1000 genomes]
rs12148672
0.86[ASN][1000 genomes]
rs12438183
0.81[AMR][1000 genomes]
rs34641633
0.93[ASN][1000 genomes]
rs6416552
0.81[AMR][1000 genomes]
rs6416553
0.81[AMR][1000 genomes]
rs6416554
0.81[AMR][1000 genomes]
rs6496692
0.95[ASN][1000 genomes]
rs6496697
0.81[AMR][1000 genomes]
rs6496698
0.81[AMR][1000 genomes]
rs71311223
0.81[ASN][1000 genomes]
rs7171629
0.81[AMR][1000 genomes]
rs8042497
0.84[AMR][1000 genomes];0.86[ASN][1000 genomes]
rSNP related genes
Symbol
Regulation type
CRTC3
RNA binding protein mediated regulation
rSNP related regulatory elements
Proximal transcriptional regulation
Distal transcriptional regulation
Post-transcriptional regulation:within mature miRNA
Post-transcriptional regulation: associated with RNA binding protein
eQTL evidence (count: 0)