SNP Report

Basic Infomation

Name	rs7295305 dbSNP
Location	chr:12,12632739
Allele	T/G

LD-proxy of rSNPs(r²>0.8) (count: 31)

The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r² >=0.8.

rs_ID	r²[population][source]
rs10743988	0.91[ASN][1000 genomes]
rs10772570	0.96[CEU][hapmap];0.82[AMR][1000 genomes];0.81[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs10845552	0.86[CHB][hapmap];0.87[MEX][hapmap]
rs10845559	0.90[CHB][hapmap];0.92[CHD][hapmap];0.87[MEX][hapmap];0.92[ASN][1000 genomes]
rs10845560	1.00[CHB][hapmap];0.94[CHD][hapmap];0.87[MEX][hapmap];0.91[ASN][1000 genomes]
rs10845567	0.94[CHB][hapmap];0.91[ASN][1000 genomes]
rs10845568	0.85[CEU][hapmap]
rs10845572	0.85[CEU][hapmap];0.95[CHB][hapmap];0.94[CHD][hapmap];0.88[GIH][hapmap];0.90[JPT][hapmap];0.82[MEX][hapmap];0.85[MKK][hapmap];0.82[TSI][hapmap];0.82[YRI][hapmap];0.93[ASN][1000 genomes]
rs11054937	0.91[ASN][1000 genomes]
rs11054940	0.94[ASW][hapmap];0.92[CEU][hapmap];0.95[CHB][hapmap];0.97[CHD][hapmap];0.91[GIH][hapmap];0.90[JPT][hapmap];0.82[MEX][hapmap];0.85[MKK][hapmap];0.84[TSI][hapmap];0.89[YRI][hapmap];0.97[ASN][1000 genomes]
rs11054941	1.00[CHB][hapmap];0.97[CHD][hapmap];0.87[MEX][hapmap];0.91[ASN][1000 genomes]
rs11054942	0.83[ASW][hapmap];0.92[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];0.91[GIH][hapmap];0.90[JPT][hapmap];0.95[MEX][hapmap];0.95[TSI][hapmap];0.82[YRI][hapmap];0.89[AMR][1000 genomes];0.86[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs11054947	0.90[AMR][1000 genomes];0.86[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs11613385	0.85[CEU][hapmap];0.95[CHB][hapmap];0.90[JPT][hapmap];0.82[YRI][hapmap];0.94[ASN][1000 genomes]
rs12422540	1.00[CHB][hapmap];0.92[ASN][1000 genomes]
rs1558822	0.80[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs2041927	0.88[CEU][hapmap]
rs2111271	0.90[CHB][hapmap];0.87[ASN][1000 genomes]
rs2417190	1.00[CHB][hapmap];0.90[JPT][hapmap];0.90[YRI][hapmap];0.80[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs3815591	0.87[AMR][1000 genomes];0.81[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs4255620	0.91[ASN][1000 genomes]
rs4763832	0.87[ASN][1000 genomes]
rs4763833	0.84[ASW][hapmap];1.00[CEU][hapmap];0.95[CHB][hapmap];0.87[CHD][hapmap];0.95[GIH][hapmap];0.85[JPT][hapmap];0.95[MEX][hapmap];0.85[MKK][hapmap];1.00[TSI][hapmap];0.90[YRI][hapmap];0.81[AFR][1000 genomes];0.97[AMR][1000 genomes];1.00[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs7137455	0.85[CEU][hapmap];1.00[CHB][hapmap];0.94[CHD][hapmap];0.93[GIH][hapmap];0.90[JPT][hapmap];0.82[MEX][hapmap];0.86[MKK][hapmap];0.85[TSI][hapmap];0.82[YRI][hapmap];0.96[ASN][1000 genomes]
rs7294378	0.84[ASN][1000 genomes]
rs7295427	0.92[AMR][1000 genomes];0.85[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs7308097	0.82[YRI][hapmap]
rs7310652	0.91[ASN][1000 genomes]
rs7972902	0.84[ASW][hapmap];0.92[CEU][hapmap];0.95[CHB][hapmap];0.97[CHD][hapmap];0.91[GIH][hapmap];0.85[JPT][hapmap];0.82[MEX][hapmap];0.85[TSI][hapmap];0.90[YRI][hapmap];0.97[ASN][1000 genomes]
rs933575	0.95[CHB][hapmap];0.92[CHD][hapmap];0.87[MEX][hapmap];0.92[ASN][1000 genomes]
rs962928	1.00[CHB][hapmap];0.94[CHD][hapmap];0.87[MEX][hapmap];0.91[ASN][1000 genomes]

rSNP related genes

Symbol	Regulation type
DUSP16	RNA binding protein mediated regulation

rSNP related regulatory elements

Proximal transcriptional regulation

Distal transcriptional regulation

Post-transcriptional regulation:within mature miRNA

Post-transcriptional regulation: associated with RNA binding protein

eQTL evidence (count: 1)