SNP Report

Basic Infomation

Name	rs10743988 dbSNP
Location	chr:12,12654626
Allele	C/T

LD-proxy of rSNPs(r²>0.8) (count: 31)

The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r² >=0.8.

rs_ID	r²[population][source]
rs10743989	0.82[AFR][1000 genomes]
rs10772570	0.80[ASN][1000 genomes]
rs10845552	0.85[AMR][1000 genomes]
rs10845559	0.93[AFR][1000 genomes];0.99[AMR][1000 genomes];0.99[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs10845560	0.95[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs10845563	0.81[AFR][1000 genomes]
rs10845567	0.95[AMR][1000 genomes];0.95[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs10845572	0.90[ASN][1000 genomes]
rs11054937	0.99[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs11054940	0.94[ASN][1000 genomes]
rs11054941	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.98[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs11054942	0.94[ASN][1000 genomes]
rs11054947	0.91[ASN][1000 genomes]
rs11613385	0.91[ASN][1000 genomes]
rs12422540	0.93[AMR][1000 genomes];0.98[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs1558822	0.94[ASN][1000 genomes]
rs2111271	0.86[AMR][1000 genomes];0.93[ASN][1000 genomes]
rs2417190	0.92[ASN][1000 genomes]
rs3815591	0.88[ASN][1000 genomes]
rs4255620	0.83[AFR][1000 genomes];0.97[AMR][1000 genomes];1.00[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs4763832	0.83[ASN][1000 genomes]
rs4763833	0.88[ASN][1000 genomes]
rs7137455	0.93[ASN][1000 genomes]
rs7294378	0.80[AMR][1000 genomes];0.90[ASN][1000 genomes]
rs7295305	0.91[ASN][1000 genomes]
rs7295427	0.85[ASN][1000 genomes]
rs7310652	0.95[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs7972902	0.94[ASN][1000 genomes]
rs933575	0.87[AMR][1000 genomes];0.86[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs962927	0.83[EUR][1000 genomes]
rs962928	0.95[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];0.99[ASN][1000 genomes]

rSNP related genes

Symbol	Regulation type
DUSP16	RNA binding protein mediated regulation

rSNP related regulatory elements

Proximal transcriptional regulation

Distal transcriptional regulation

Post-transcriptional regulation:within mature miRNA

Post-transcriptional regulation: associated with RNA binding protein

eQTL evidence (count: 0)