SNP Report

Basic Infomation

Name	rs6708277 dbSNP
Location	chr:2,61624840
Allele	C/T

LD-proxy of rSNPs(r²>0.8) (count: 30)

The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r² >=0.8.

rs_ID	r²[population][source]
rs10169662	0.81[AMR][1000 genomes];0.81[ASN][1000 genomes]
rs10865324	0.89[AFR][1000 genomes];0.98[AMR][1000 genomes];0.98[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs11677775	0.81[AMR][1000 genomes];0.82[ASN][1000 genomes]
rs11677776	0.80[AMR][1000 genomes];0.82[ASN][1000 genomes]
rs1186696	0.87[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs12616433	0.90[EUR][1000 genomes]
rs12617371	0.83[AMR][1000 genomes];0.80[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs13028833	0.91[AMR][1000 genomes];0.97[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs1867838	0.88[EUR][1000 genomes]
rs2084318	0.87[AMR][1000 genomes];0.96[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs2421196	0.91[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs2421200	0.83[EUR][1000 genomes]
rs2442025	0.84[AFR][1000 genomes];0.84[AMR][1000 genomes];0.83[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs2442037	0.85[AMR][1000 genomes];0.93[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs2694627	0.91[AFR][1000 genomes];0.96[AMR][1000 genomes];0.94[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs2922089	1.00[AFR][1000 genomes];0.98[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs3213951	0.89[ASN][1000 genomes]
rs34668697	0.84[AFR][1000 genomes];0.84[AMR][1000 genomes];0.82[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs4671403	0.80[AMR][1000 genomes]
rs4672440	0.88[ASN][1000 genomes]
rs4672441	0.87[ASN][1000 genomes]
rs6545850	0.80[AMR][1000 genomes];0.82[ASN][1000 genomes]
rs6545855	0.83[AMR][1000 genomes];0.84[ASN][1000 genomes]
rs6545868	0.85[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs7584500	0.90[EUR][1000 genomes]
rs7587389	0.87[AMR][1000 genomes];0.96[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs778139	0.94[EUR][1000 genomes]
rs778150	0.87[AMR][1000 genomes];0.85[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs778153	0.94[AFR][1000 genomes];0.98[AMR][1000 genomes];0.96[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs811871	0.85[AFR][1000 genomes];0.85[AMR][1000 genomes];0.83[EUR][1000 genomes];0.92[ASN][1000 genomes]

rSNP related genes

Symbol	Regulation type
XPO1	Distal transcriptional regulation

rSNP related regulatory elements

Proximal transcriptional regulation

Distal transcriptional regulation

Post-transcriptional regulation:within mature miRNA

Post-transcriptional regulation: associated with RNA binding protein

eQTL evidence (count: 0)