SNP Report

Basic Infomation

Name	rs2442025 dbSNP
Location	chr:2,61571445
Allele	G/A

LD-proxy of rSNPs(r²>0.8) (count: 33)

The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r² >=0.8.

rs_ID	r²[population][source]
rs10169482	0.81[ASN][1000 genomes]
rs10169662	0.92[AMR][1000 genomes];0.90[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs10865324	0.86[AMR][1000 genomes];0.82[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs11677775	0.92[AMR][1000 genomes];0.90[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs11677776	0.91[AMR][1000 genomes];0.90[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs1186696	0.83[EUR][1000 genomes]
rs12617371	0.94[AFR][1000 genomes];0.99[AMR][1000 genomes];0.94[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs13028833	0.82[AMR][1000 genomes];0.82[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs2084318	0.82[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs2123111	0.82[EUR][1000 genomes]
rs2421196	0.89[ASN][1000 genomes]
rs2442037	0.87[ASN][1000 genomes]
rs2463102	0.83[AFR][1000 genomes]
rs2593633	0.86[AFR][1000 genomes]
rs2694627	0.84[AMR][1000 genomes];0.84[ASN][1000 genomes]
rs2922089	0.84[AFR][1000 genomes];0.86[AMR][1000 genomes];0.83[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs3213951	0.82[ASN][1000 genomes]
rs34668697	0.99[AFR][1000 genomes];1.00[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4671403	0.91[AMR][1000 genomes];0.88[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs4672427	0.81[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs4672440	0.80[ASN][1000 genomes]
rs4672441	0.83[ASN][1000 genomes]
rs6545850	0.91[AMR][1000 genomes];0.83[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs6545855	0.95[AMR][1000 genomes];0.90[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs6708277	0.84[AFR][1000 genomes];0.84[AMR][1000 genomes];0.83[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs6737373	0.83[ASN][1000 genomes]
rs68020555	0.82[ASN][1000 genomes]
rs7583383	0.84[ASN][1000 genomes]
rs7587389	0.81[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs777587	0.81[EUR][1000 genomes]
rs778150	0.80[AMR][1000 genomes];0.92[ASN][1000 genomes]
rs778153	0.89[AFR][1000 genomes];0.86[AMR][1000 genomes];0.85[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs811871	0.97[AFR][1000 genomes];0.99[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]

rSNP related genes

Symbol	Regulation type
USP34	Distal transcriptional regulation

rSNP related regulatory elements

Proximal transcriptional regulation

Distal transcriptional regulation

Post-transcriptional regulation:within mature miRNA

Post-transcriptional regulation: associated with RNA binding protein

eQTL evidence (count: 0)