SNP Report

Basic Infomation

Name	rs2123111 dbSNP
Location	chr:2,61450454
Allele	A/G

LD-proxy of rSNPs(r²>0.8) (count: 43)

The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r² >=0.8.

rs_ID	r²[population][source]
rs10169482	0.94[ASN][1000 genomes]
rs10169662	0.83[AMR][1000 genomes];0.87[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs11677775	0.83[AMR][1000 genomes];0.89[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs11677776	0.82[AMR][1000 genomes];0.89[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs11685226	0.84[AMR][1000 genomes];0.82[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs1177302	0.82[AMR][1000 genomes];0.84[ASN][1000 genomes]
rs1177305	0.82[AMR][1000 genomes];0.80[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs1177307	0.80[AMR][1000 genomes];0.85[ASN][1000 genomes]
rs1177308	0.81[AMR][1000 genomes];0.80[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs1177309	0.81[AMR][1000 genomes];0.84[ASN][1000 genomes]
rs11886950	0.87[AMR][1000 genomes];0.82[ASN][1000 genomes]
rs11897994	0.88[AMR][1000 genomes];0.84[ASN][1000 genomes]
rs11903270	0.88[AMR][1000 genomes];0.84[ASN][1000 genomes]
rs12617371	0.80[EUR][1000 genomes]
rs14170	0.90[AMR][1000 genomes];0.85[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs1615070	0.83[AMR][1000 genomes];0.85[ASN][1000 genomes]
rs1729674	0.83[AMR][1000 genomes];0.84[ASN][1000 genomes]
rs2123112	0.94[AFR][1000 genomes];0.89[AMR][1000 genomes];0.81[EUR][1000 genomes]
rs2167564	0.80[AMR][1000 genomes]
rs2442025	0.82[EUR][1000 genomes]
rs2600668	0.81[AFR][1000 genomes];0.80[AMR][1000 genomes]
rs2600669	0.85[ASN][1000 genomes]
rs2600670	0.84[AMR][1000 genomes]
rs34668697	0.85[EUR][1000 genomes]
rs35015708	0.81[AMR][1000 genomes];0.80[ASN][1000 genomes]
rs35341794	0.84[AMR][1000 genomes];0.85[ASN][1000 genomes]
rs35507645	0.84[AMR][1000 genomes];0.82[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs3889717	0.82[AMR][1000 genomes];0.84[ASN][1000 genomes]
rs4671403	0.82[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs4672424	0.97[AMR][1000 genomes];0.97[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs4672427	0.86[AMR][1000 genomes];0.97[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs55908966	0.82[ASN][1000 genomes]
rs60997156	0.84[AMR][1000 genomes];0.82[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs6545846	0.82[AFR][1000 genomes];0.84[AMR][1000 genomes];0.81[ASN][1000 genomes]
rs6545850	0.82[AMR][1000 genomes];0.87[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs6545855	0.85[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs68020555	0.93[ASN][1000 genomes]
rs72884963	0.88[AMR][1000 genomes];0.82[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs7558954	0.81[AMR][1000 genomes];0.84[ASN][1000 genomes]
rs777587	0.85[AFR][1000 genomes];0.97[AMR][1000 genomes];0.99[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs777592	0.84[ASN][1000 genomes]
rs811871	0.81[EUR][1000 genomes]
rs935860	0.81[AFR][1000 genomes];0.93[AMR][1000 genomes];0.85[EUR][1000 genomes];0.88[ASN][1000 genomes]

rSNP related genes

Symbol	Regulation type
USP34	Proximal transcriptional regulation

rSNP related regulatory elements

Proximal transcriptional regulation

Distal transcriptional regulation

Post-transcriptional regulation:within mature miRNA

Post-transcriptional regulation: associated with RNA binding protein

eQTL evidence (count: 0)